Connecting Java/ImgLib2 + Python/NumPy
☆32Jun 17, 2026Updated 4 months ago
Alternatives and similar repositories for imglyb
Users that are interested in imglyb are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- python tools for BigDataViewer☆23Jul 2, 2026Updated 4 months ago
- ⚡ Supercharged Java access from Python ⚡☆56Updated this week
- Python package for writing 5D numpy arrays to HDF5 files readable by both Imaris and BigDataViewer☆12Aug 13, 2021Updated 5 years ago
- Lattice light-sheet post-processing utility.☆30Oct 5, 2026Updated 3 weeks ago
- Code for simulating a multi-view acquisition including attenuation, convolution, reduced sampling and poission noise☆12Jun 15, 2026Updated 4 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- An ImageJ/R pipeline for filopodia dynamics analysis☆11Feb 5, 2024Updated 2 years ago
- sciview is a tool for visualization and interaction with ND image and mesh data☆75Sep 8, 2026Updated last month
- ☆13Apr 27, 2020Updated 6 years ago
- Advanced Tool for Labeling And Segmentation☆41Oct 21, 2024Updated 2 years ago
- A napari plugin for stitching large multi-positioning datasets in 2/3D+t using multiview-stitcher☆19Jul 26, 2026Updated 3 months ago
- ☆20Apr 6, 2022Updated 4 years ago
- Helpers to use BigDataViewer as a quick visualization tool in other projects.☆26Jun 13, 2024Updated 2 years ago
- ImgLib2/BDV implementation of Stitching for large datasets☆84Oct 9, 2026Updated 3 weeks ago
- CLIJ is deprecated. Visit CLIJ2☆57Jun 12, 2021Updated 5 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- SLM binary mask generator for Lattice Light Sheet microscopy☆12Dec 2, 2021Updated 4 years ago
- Home of the miCube GithubPages documents.☆12Oct 3, 2026Updated 3 weeks ago
- Fiji plugin to use Cellpose with Appose☆10Updated this week
- ImgLib2-based viewer for registered SPIM stacks and more☆46Sep 9, 2026Updated last month
- Python tools for ImageJ☆13Jul 25, 2021Updated 5 years ago
- Things we use regularly☆30Jun 11, 2026Updated 4 months ago
- Benchmarking Large Language Models for Bio-Image Analysis Code Generation☆26Jun 3, 2026Updated 4 months ago
- Friendly base POM for all SciJava-based software☆28Updated this week
- Image processing algorithms for ImgLib2☆24Oct 24, 2026Updated last week
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Use ImageJ from Python☆535Oct 1, 2026Updated last month
- Fast 4-coloring of instance segmentation label images (N-color relabeling) for Python, C++ core☆16Sep 28, 2026Updated last month
- Icy kernel module☆61Oct 8, 2026Updated 3 weeks ago
- Use ImageJ functionality from napari☆35Oct 24, 2026Updated last week
- Image acquisition software for mesoSPIM light-sheet microscopes.☆49Oct 12, 2026Updated 3 weeks ago
- ☆42May 6, 2024Updated 2 years ago
- ☆20Oct 24, 2026Updated last week
- Real-time feedback control microscopy for automation of optogenetic targeting☆19Oct 19, 2026Updated 2 weeks ago
- [DEPREACATED] Python interface for data-driven microscopy with Micro-manager/Micro-Magellan☆14May 13, 2020Updated 6 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Blue Brain multi-modal registration and alignment toolbox☆12Feb 14, 2024Updated 2 years ago
- Acquire: a multi-camera video streaming software focusing on microscopy☆26Oct 30, 2024Updated 2 years ago
- Various parts made for fluorescence microscopy + optics work☆19Jul 22, 2019Updated 7 years ago
- Mistral-java-client is a client for the Mistral.ai API. It allows you to easily interact with the Mistral AI models. Currently supports a…☆16Jul 28, 2025Updated last year
- ☆15Oct 21, 2026Updated last week
- FIJI plugin for tracing of curvilinear structures in volumetric microscopy datasets☆31Oct 26, 2026Updated last week
- Cytomine client and utilities in Python☆24Oct 1, 2025Updated last year