mesoSPIM / mesoSPIM-controlLinks
Image acquisition software for mesoSPIM light-sheet microscopes.
☆45Updated this week
Alternatives and similar repositories for mesoSPIM-control
Users that are interested in mesoSPIM-control are comparing it to the libraries listed below
Sorting:
- Parts list and build instructions for our high-numerical-aperture lightsheet. Read the publication here: https://andrewgyork.github.io/hi…☆22Updated last year
- Fast writing of numpy 3d-arrays into HDF5 Fiji/BigDataViewer files.☆34Updated last year
- Create 3D/4D animations using a natural language-based syntax☆61Updated 8 months ago
- A hub to start the next generation of Microscope Control Software☆59Updated 5 years ago
- High-Resolution, Large Field-of-View, and Multi-ViewSingle Objective Light-Sheet Microscopy☆31Updated last year
- Python wrapper for cudaDecon - GPU accelerated 3D deconvolution for microscopy☆71Updated last week
- Archived: control, reconstruction, and analysis code for oblique plane microscopy.☆22Updated 10 months ago
- A toolbox for registering / fusing / stitching large multi-view / multi-positioning image datasets in 2-3D.☆102Updated last week
- Lattice light-sheet post-processing utility.☆30Updated last week
- A napari plugin to analysis point spread functions.☆12Updated 10 months ago
- ImageJ convenience layer for N5☆19Updated this week
- ☆49Updated 2 months ago
- Config and scripts used to run a Nikon Eclipse Ti in the vanNimwegen lab.☆22Updated last year
- ImSwitch is a software solution in Python that aims at generalizing microscope control by providing a solution for flexible control of mu…☆82Updated last week
- GUI interface between napari and micromanager powered by pymmcore-plus and pymmcore-widgets☆74Updated last week
- Things we use regularly☆29Updated 6 months ago
- Acquire: a multi-camera video streaming software focusing on microscopy☆23Updated last year
- Use ImageJ functionality from napari☆33Updated last month
- Various parts made for fluorescence microscopy + optics work☆16Updated 6 years ago
- Create movies from series of key-frames in napari.☆38Updated 4 years ago
- Adaptive Optics plugin for MicroManager☆12Updated 3 years ago
- Fast4DReg is a Fiji script for quick drift correction in time-lapse 3D-stacks. The script can be used to correct drift in all x-, y- and/…☆40Updated 9 months ago
- An implementation agnostic schema for describing a sequence of events during a multi-dimensional imaging acquisition.☆20Updated this week
- A python library for advanced lattice light-sheet image analysis☆21Updated 5 years ago
- ☆38Updated last year
- Linking napari layers with Matplotlib plots☆43Updated last week
- ☆24Updated 4 months ago
- Process images using SimpleITK in napari☆23Updated 9 months ago
- Pure python/C++ micro-manager ecosystem☆46Updated this week
- A self-supervised denoising algorithm.☆28Updated last year