mesoSPIM / mesoSPIM-controlLinks
Image acquisition software for mesoSPIM light-sheet microscopes.
☆45Updated this week
Alternatives and similar repositories for mesoSPIM-control
Users that are interested in mesoSPIM-control are comparing it to the libraries listed below
Sorting:
- Parts list and build instructions for our high-numerical-aperture lightsheet. Read the publication here: https://andrewgyork.github.io/hi…☆22Updated last year
- High-Resolution, Large Field-of-View, and Multi-ViewSingle Objective Light-Sheet Microscopy☆31Updated last year
- A hub to start the next generation of Microscope Control Software☆59Updated 5 years ago
- Python wrapper for cudaDecon - GPU accelerated 3D deconvolution for microscopy☆71Updated last week
- Create 3D/4D animations using a natural language-based syntax☆61Updated 8 months ago
- Lattice light-sheet post-processing utility.☆30Updated last week
- Fast writing of numpy 3d-arrays into HDF5 Fiji/BigDataViewer files.☆34Updated last year
- Archived: control, reconstruction, and analysis code for oblique plane microscopy.☆22Updated 10 months ago
- Various parts made for fluorescence microscopy + optics work☆16Updated 6 years ago
- Config and scripts used to run a Nikon Eclipse Ti in the vanNimwegen lab.☆22Updated last year
- ImageJ convenience layer for N5☆19Updated this week
- Things we use regularly☆29Updated 6 months ago
- A toolbox for registering / fusing / stitching large multi-view / multi-positioning image datasets in 2-3D.☆102Updated last week
- Pure python/C++ micro-manager ecosystem☆46Updated this week
- GPU accelerated beam propagation tools for biological light tissue simulations☆39Updated 7 years ago
- ImSwitch is a software solution in Python that aims at generalizing microscope control by providing a solution for flexible control of mu…☆82Updated last week
- Process images using SimpleITK in napari☆23Updated 9 months ago
- Use ImageJ functionality from napari☆33Updated last month
- An implementation agnostic schema for describing a sequence of events during a multi-dimensional imaging acquisition.☆20Updated last week
- GUI interface between napari and micromanager powered by pymmcore-plus and pymmcore-widgets☆74Updated last week
- ☆49Updated 2 months ago
- MSSR Plugin☆14Updated last year
- A napari plugin to analysis point spread functions.☆12Updated 10 months ago
- ☆13Updated 5 years ago
- Python bindings for MMCore, Micro-Manager's device control layer☆35Updated last month
- Adaptive Optics plugin for MicroManager☆12Updated 3 years ago
- ImageJ plugin detecting and colocalizing particles of given size (vesicles, dots, etc on biological microscopy images)☆19Updated 7 months ago
- ☆38Updated last year
- Python control of micro-manager for customized data acquisition☆178Updated 5 months ago
- Hardware documentation for the mesoSPIM microscope project☆34Updated 5 months ago