Alternatives and similar repositories for mesoSPIM-control

Users that are interested in mesoSPIM-control are comparing it to the libraries listed below

• AndrewGYork / high_na_single_objective_lightsheet
  Parts list and build instructions for our high-numerical-aperture lightsheet. Read the publication here: https://andrewgyork.github.io/hi…
  ☆22Updated last year
• nicost / uScopeControl
  A hub to start the next generation of Microscope Control Software
  ☆59Updated 4 years ago
• royerlab / daxi
  High-Resolution, Large Field-of-View, and Multi-ViewSingle Objective Light-Sheet Microscopy
  ☆29Updated last year
• bene51 / 3Dscript
  Create 3D/4D animations using a natural language-based syntax
  ☆61Updated 6 months ago
• nvladimus / npy2bdv
  Fast writing of numpy 3d-arrays into HDF5 Fiji/BigDataViewer files.
  ☆34Updated last year
• tlambert03 / LLSpy
  Lattice light-sheet post-processing utility.
  ☆30Updated 3 weeks ago
• tlambert03 / pycudadecon
  Python wrapper for cudaDecon - GPU accelerated 3D deconvolution for microscopy
  ☆71Updated 3 weeks ago
• adanog / MSSR
  MSSR Plugin
  ☆14Updated last year
• AndrewGYork / tools
  Things we use regularly
  ☆29Updated 4 months ago
• ImSwitch / ImSwitch
  ImSwitch is a software solution in Python that aims at generalizing microscope control by providing a solution for flexible control of mu…
  ☆81Updated 2 weeks ago
• PRNicovich / 3D-Printed-Optics-Lab-Parts
  Various parts made for fluorescence microscopy + optics work
  ☆16Updated 6 years ago
• pymmcore-plus / napari-micromanager
  GUI interface between napari and micromanager powered by pymmcore-plus and pymmcore-widgets
  ☆74Updated last week
• maweigert / biobeam
  GPU accelerated beam propagation tools for biological light tissue simulations
  ☆38Updated 7 years ago
• abcucberkeley / PetaKit5D
  ☆49Updated 2 weeks ago
• micro-manager / pycro-manager
  Python control of micro-manager for customized data acquisition
  ☆176Updated 4 months ago
• QI2lab / OPM
  Archived: control, reconstruction, and analysis code for oblique plane microscopy.
  ☆22Updated 8 months ago
• pymmcore-plus / useq-schema
  An implementation agnostic schema for describing a sequence of events during a multi-dimensional imaging acquisition.
  ☆20Updated this week
• nimwegenLab / MiM_NikonTi
  Config and scripts used to run a Nikon Eclipse Ti in the vanNimwegen lab.
  ☆22Updated last year
• saalfeldlab / n5-ij
  ImageJ convenience layer for N5
  ☆19Updated last month
• pymmcore-plus / pymmcore-plus
  Pure python/C++ micro-manager ecosystem
  ☆44Updated this week
• UU-cellbiology / ComDet
  ImageJ plugin detecting and colocalizing particles of given size (vesicles, dots, etc on biological microscopy images)
  ☆19Updated 6 months ago
• multiview-stitcher / multiview-stitcher
  A toolbox for registering / fusing / stitching large multi-view / multi-positioning image datasets in 2-3D.
  ☆99Updated this week
• mesoSPIM / mesoSPIM-hardware-documentation
  Hardware documentation for the mesoSPIM microscope project
  ☆34Updated 4 months ago
• imaris / ImarisWriter
  ☆38Updated last year
• pylattice / pyLattice
  A python library for advanced lattice light-sheet image analysis
  ☆21Updated 5 years ago
• MSiemons / REALM
  Adaptive Optics plugin for MicroManager
  ☆12Updated 3 years ago
• fmi-faim / napari-psf-analysis
  A napari plugin to analysis point spread functions.
  ☆13Updated 8 months ago
• CSBDeep / CSBDeep_fiji
  ☆13Updated 5 years ago
• MicroscPSF / MicroscPSF-Py
  Fast and Accurate 3D PSF Computation for Fluorescence Microscopy
  ☆47Updated 2 months ago
• acquire-project / acquire-python
  Acquire: a multi-camera video streaming software focusing on microscopy
  ☆23Updated last year