Software for FLT3-ITD detection and MRD monitoring assay
☆14Jul 22, 2022Updated 3 years ago
Alternatives and similar repositories for getitd
Users that are interested in getitd are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A python tool to detect internal tandem duplication with robust variant allele frequency estimation☆12Feb 3, 2026Updated last month
- C++ tools for NCBI taxonomy tasks☆12Jun 26, 2025Updated 9 months ago
- FLT3 ITD detection (ITDseek) and simulation (ITDsim)☆14Feb 27, 2019Updated 7 years ago
- Fragmentase Artifact Detection and Elimination☆12Mar 22, 2022Updated 4 years ago
- Sample Contamination Estimate from VCF☆20Nov 6, 2024Updated last year
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click and start building anything your business needs.
- Create "haplotype maps" of variants in order to use with Picardtools Crosscheck_Files utility, which allows for robust genotyping of func…☆28Jan 4, 2024Updated 2 years ago
- FLT3-ITD script based on in-silico extension and clustering☆14Jun 9, 2021Updated 4 years ago
- Tandem Repeats Caller for LOng Reads☆17May 28, 2021Updated 4 years ago
- Automated ACMG/AMP classification for human variants associated with congenital hearing loss☆11May 14, 2025Updated 10 months ago
- reference implementation of GA4GH WGS Quality Control Standards☆11Nov 25, 2025Updated 4 months ago
- As part of the COVID-19 Host Genetics Global initative, this repo serves to corroborate sample scripts for sequencing QC.☆12Jul 30, 2020Updated 5 years ago
- Python package for cancer early detection based on a model of cancer evolution and circulating tumor DNA (ctDNA) shedding☆13Jan 8, 2021Updated 5 years ago
- Joint calling of gVCF, following GATK4 Best Practices☆12Apr 3, 2019Updated 6 years ago
- Research pipeline for exploring clinically relevant genomic variants☆16Updated this week
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- An efficient tool for cross-population fixation index estimation on variant call format files☆11Mar 1, 2026Updated 3 weeks ago
- Tree reconstruction of ancestry using incomplete lineage sorting☆11Jan 9, 2026Updated 2 months ago
- Snakemake workflow for scoring and comparing multiple bacterial genome assemblies (Illumina, Nanopore) to reference genome(s).☆26Apr 5, 2024Updated last year
- a parallel R package for detecting copy-number alterations from short sequencing reads☆24Jul 15, 2021Updated 4 years ago
- HaploSweep is a method for detecting and categorizing soft and hard selective sweeps based on haplotype structure.☆11Sep 24, 2024Updated last year
- Statistical inference of recent positive selection using IBD segments☆14Sep 23, 2025Updated 6 months ago
- Tissue-specific variant annotation☆10Nov 19, 2018Updated 7 years ago
- Covid-19 HGI WES/WGS burden test BQC-19 pipeline☆16May 26, 2022Updated 3 years ago
- SOAP-HLA is a flow of sequencing data analysis pipeline to type all of the HLA genes in IMGT/HLA database using capture sequenced data or…☆10Jun 3, 2020Updated 5 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click and start building anything your business needs.
- Enformer Celltyping is a tensorflow, multi-headed attention based model that incorporates distal effects of Deoxyribonucleic Acid (DNA) i…☆16Jun 25, 2025Updated 9 months ago
- NHC: A computational approach to detect physiological homogeneity in the midst of genetic heterogeneity☆12Feb 25, 2026Updated last month
- Normalization and difference calling for Next Generation Sequencing (NGS) data via joint multinomial modeling.☆11Oct 8, 2021Updated 4 years ago
- Portable database of microhaplotype marker and allele frequency data☆11Oct 2, 2025Updated 5 months ago
- Lui is a lua MVVM framework based on IUP gui library and Lockout.lua (Knockout port)☆11May 5, 2013Updated 12 years ago
- Snakemake workflow for bacterial genome assembly + polishing for Oxford Nanopore (ONT) sequencing using multiple tools.☆27Apr 23, 2024Updated last year
- GA4GH Quality Control of Whole Genome Sequencing's metrics definition, benchmark resources and reference implementations☆22Mar 12, 2026Updated 2 weeks ago
- an R package collection for topological data analysis☆15Feb 25, 2026Updated last month
- SparsePainter: fast, accurate and fine-scale chromosome painting software based on PBWT and HashMap☆18Feb 11, 2026Updated last month
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- Lua module to emulate a Lua Terminal in a IUP toolkit textbox to easily embed in any IUP application☆16Jul 29, 2024Updated last year
- Plot allele frequencies in VCF files☆11Jun 4, 2019Updated 6 years ago
- Set of useful lua functions for manipulating tables.☆12Jan 22, 2020Updated 6 years ago
- Splicing Prediction Pipeline☆14Aug 12, 2023Updated 2 years ago
- automatic update Clinvar db for ANNOVAR☆10Mar 16, 2026Updated last week
- An AI-powered Mattermost ChatGPT chatbot that utilizes the OpenAI API to provide helpful, contextual responses to user messages, extract …☆16Jan 7, 2026Updated 2 months ago
- Pure Lua implementation of alert dialog box (functionality similar to JavaScript alert() function).☆12Nov 12, 2018Updated 7 years ago