ccmbioinfo / crg2Links
Research pipeline for exploring clinically relevant genomic variants
☆16Updated 2 months ago
Alternatives and similar repositories for crg2
Users that are interested in crg2 are comparing it to the libraries listed below
Sorting:
- Automated next generation DNA sequencing analysis pipeline suited for clinical tests, with >99.9% sensitivity to Sanger sequencing at rea…☆26Updated 6 years ago
- Genomes on the Cloud, Mapping & Variant Calling Pipelines☆33Updated 8 years ago
- Interpretable prioritization of splice variants in diagnostic next-generation sequencing☆18Updated last year
- List of IARC bioinformatics pipelines and resources☆56Updated last month
- Bioinformatic Analysis pipeLine for SomAtic Mutations In Cancer☆57Updated this week
- Generic human DNA variant annotation pipeline☆59Updated last year
- CADD-SV – a framework to score the effect of structural variants☆18Updated this week
- Mutation Identification Pipeline. Read the latest documentation:☆47Updated 2 months ago
- LIkelihood Ratio Interpretation of Clinical AbnormaLities☆33Updated 2 months ago
- Preprocessing tools for unique molecular index (UMI) sequencing reads☆31Updated 2 years ago
- RetroSeq is a bioinformatics tool that searches for mobile element insertions from aligned reads in a BAM file and a library of reference…☆67Updated 3 years ago
- Merging, Annotation, Validation, and Illustration of Structural variants☆75Updated 2 years ago
- Automated human exome/genome variants detection from FASTQ files☆23Updated 4 years ago
- ☆44Updated last year
- SiNVICT: Ultra-Sensitive Detection of Single Nucleotide Variants and Indels in Circulating Tumour DNA☆27Updated 5 years ago
- Script to convert GTC/BPM files to VCF☆48Updated 3 months ago
- ⚙️ A lightweight immune repertoire browser☆27Updated 6 years ago
- TIDDIT - structural variant calling☆78Updated last month
- Genomic VCF to tab-separated values☆48Updated 2 years ago
- A software for calculating telomere length☆73Updated 7 years ago
- PathOS is a clinical application for filtering, analysing and reporting on NGS variants☆29Updated 4 years ago
- QC3, a quality control tool designed for DNA sequencing data for raw data, alignment, and variant calling.☆32Updated 9 years ago
- mity: A highly sensitive mitochondrial variant analysis pipeline for whole genome sequencing data☆40Updated 4 months ago
- ☆27Updated last year
- Tools for processing and analyzing structural variants.☆34Updated 10 years ago
- VCF-Miner: A graphical user interface for sorting, filtering and querying annotated VCF Files☆37Updated 6 years ago
- CLAMMS is a scalable tool for detecting common and rare copy number variants from whole-exome sequencing data.☆30Updated 4 years ago
- ☆46Updated 6 years ago
- R package for inferring copy number from read depth☆32Updated 3 years ago
- Bamgineer: Introduction of simulated allele-specific copy number variants into exome and targeted sequence data sets☆38Updated 5 years ago