Research pipeline for exploring clinically relevant genomic variants
☆18Jul 20, 2026Updated 3 months ago
Alternatives and similar repositories for crg2
Users that are interested in crg2 are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Automated ACMG/AMP classification for human variants associated with congenital hearing loss☆11May 14, 2025Updated last year
- As part of the COVID-19 Host Genetics Global initative, this repo serves to corroborate sample scripts for sequencing QC.☆12Jul 30, 2020Updated 6 years ago
- Clinical Variant Annotation Pipeline☆10Apr 21, 2020Updated 6 years ago
- TAPES : a Tool for Assessment and Prioritisation in Exome Studies☆27Jun 22, 2026Updated 4 months ago
- ☆12Sep 30, 2026Updated last month
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Visualizing genetic sequence variation☆14Apr 27, 2020Updated 6 years ago
- Phenotype driven gene prioritization for HPO☆53Jul 26, 2021Updated 5 years ago
- GARFIELD-NGS: Genomic vARiants FIltering by dEep Learning moDels in NGS☆16Mar 4, 2019Updated 7 years ago
- Allele frequency filter app☆15May 4, 2022Updated 4 years ago
- Clinical machine-learning based interpreter of germline mutations.☆11Mar 13, 2025Updated last year
- Whole Genome Sequenceing Structural Variation Pipelines☆18Apr 4, 2019Updated 7 years ago
- CLAMMS is a scalable tool for detecting common and rare copy number variants from whole-exome sequencing data.☆31Feb 20, 2021Updated 5 years ago
- Web-based database system for flow cell management (incl. REST API)☆16Mar 7, 2024Updated 2 years ago
- Seave is a web platform that enables genetic variants to be easily filtered and annotated with in silico pathogenicity prediction scores …☆17Aug 9, 2018Updated 8 years ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- Pathogenicity prediction and prioritization of genetic variants.☆20Sep 21, 2026Updated last month
- ☆17Oct 17, 2024Updated 2 years ago
- This is a Genome Annotation Framework developed with the goal of annotating VCF files (Exomes or Genomes) from patients with Mendelian Di…☆23Oct 13, 2026Updated 3 weeks ago
- Get a nicely-chunked local copy of the biomedical literature (to use for other projects)!☆15Oct 5, 2026Updated last month
- Cancer Predisposition Sequencing Reporter (CPSR)☆67Updated this week
- ☆13Dec 7, 2021Updated 4 years ago
- ☆19Mar 14, 2022Updated 4 years ago
- ClassifyCNV: a tool for clinical annotation of copy-number variants☆76Jun 26, 2023Updated 3 years ago
- Structural variant pipeline☆18Jun 25, 2020Updated 6 years ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- A command line program for large scale buffering between piped programs☆17Nov 19, 2021Updated 4 years ago
- structural variant database software☆50Updated this week
- reference implementation of GA4GH WGS Quality Control Standards☆12Oct 20, 2026Updated 2 weeks ago
- API-first variant triage pipeline combining genomic filtering, annotation, and LLM-driven interpretation for clinical genomics workflows☆21Apr 28, 2026Updated 6 months ago
- ☆21Aug 30, 2022Updated 4 years ago
- Unfazed by genomic variant phasing☆29May 26, 2024Updated 2 years ago
- Detect germline or somatic variants from normal or tumour/normal whole-genome or targeted sequencing☆134Jan 27, 2020Updated 6 years ago
- Joint calling of gVCF, following GATK4 Best Practices☆12Apr 3, 2019Updated 7 years ago
- ☆35Feb 16, 2023Updated 3 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Robust detection of clinically relevant structural and copy number variation from whole genome sequencing data☆73Sep 4, 2024Updated 2 years ago
- don't get DUP'ed or DEL'ed by your putative SVs.☆109Dec 14, 2020Updated 5 years ago
- VCF-Miner: A graphical user interface for sorting, filtering and querying annotated VCF Files☆37Nov 19, 2019Updated 6 years ago
- A combined deep learning tool for automated recognition of human phenotype ontology☆28Nov 29, 2022Updated 3 years ago
- myVCF: a web-based platform for target and exome mutations data management☆21Apr 13, 2021Updated 5 years ago
- ☆15Apr 2, 2025Updated last year
- ☆24May 22, 2025Updated last year