Implementation of the Leiden algorithm called by reticulate in R. (CRAN)
☆42May 26, 2024Updated last year
Alternatives and similar repositories for leiden
Users that are interested in leiden are comparing it to the libraries listed below
Sorting:
- Sparse matrix format with data on disk☆10Sep 6, 2024Updated last year
- Non Metric Space ( Approximate ) Library in R☆12Feb 2, 2023Updated 3 years ago
- Core utilities for single-cell RNA-seq☆12Apr 13, 2025Updated 10 months ago
- ☆13May 14, 2019Updated 6 years ago
- DSL for dynamic programming☆17Dec 11, 2019Updated 6 years ago
- Machine learning explanations☆24Oct 13, 2025Updated 4 months ago
- Volume-regularized NMF☆18Apr 14, 2022Updated 3 years ago
- An R-based interface for loom files☆67Jul 9, 2020Updated 5 years ago
- Encode Categorical Features (unmaintained)☆32Nov 5, 2022Updated 3 years ago
- Genie: A Fast and Robust Hierarchical Clustering Algorithm (this R package has now been superseded by genieclust)☆22May 28, 2025Updated 9 months ago
- H. Bengtsson, A Unifying Framework for Parallel and Distributed Processing in R using Futures, The R Journal, 10.32614/RJ-2021-048, 2021☆10Jan 24, 2026Updated last month
- Model-based clustering package for mixed data☆13Jun 16, 2025Updated 8 months ago
- A small R package for finding timezone names from geographic coordinates☆12Feb 27, 2018Updated 8 years ago
- AsynchroNous Disk-based Representation of MassivE DAta: An R package aimed at replacing ff for storing large data objects.☆11Nov 21, 2025Updated 3 months ago
- Faster manipulation of dendrogram objects in R.☆15May 22, 2015Updated 10 years ago
- General Regression Neural Networks☆11Oct 25, 2020Updated 5 years ago
- An R package for Neural Nets created using nnlib2☆13Mar 5, 2025Updated 11 months ago
- The Tomographer package implements the mathematical spatial image reconstruction of any set of read counts as described in the following …☆11May 15, 2021Updated 4 years ago
- Generate a spatial catalogue from multiplexed imaging data☆15Jun 12, 2025Updated 8 months ago
- Dynamic Programming implemented in Rcpp. Includes example partition and out of sample fitting applications.☆15Aug 20, 2023Updated 2 years ago
- A plumber example and discussion for meetups☆10Jun 6, 2018Updated 7 years ago
- An R package that implements fast searching for multiple keywords in multiple texts.☆11Feb 5, 2025Updated last year
- Space- and time-optimal algorithms for large single-cell expression matrices, with a focus on single-cell CRISPR screens.☆11Apr 13, 2024Updated last year
- ☆11Aug 19, 2024Updated last year
- Decision tree interpreter for randomForest/ranger as described in☆12Sep 18, 2025Updated 5 months ago
- Exploratory Principal Component Analysis☆11May 6, 2024Updated last year
- Repel Visually Similar Colors for Colorblind Users (CRAN)☆10Jul 21, 2025Updated 7 months ago
- R Implementation of FLAME, DAME, and other algorithms in the AME framework☆15Apr 12, 2023Updated 2 years ago
- scID☆14Oct 21, 2021Updated 4 years ago
- R package that allows to access Kafka☆11Dec 24, 2025Updated 2 months ago
- R interface for OSQP☆14Feb 17, 2026Updated 2 weeks ago
- Out-Of-Sample Time Series Forecasting: OOS introduces a comprehensive framework for time series forecasting with traditional econometric …☆11Mar 30, 2021Updated 4 years ago
- logistic factor analysis☆16Jan 29, 2026Updated last month
- Probabilistic single-cell pseudotime with Edward+Tensorflow☆12Oct 5, 2017Updated 8 years ago
- MEM mapper prototype☆13Nov 28, 2020Updated 5 years ago
- ☆15Updated this week
- R Package for Unconstrained Numerical Optimization☆11Feb 9, 2026Updated 3 weeks ago
- Automated marker-based annotation of cell types☆14Aug 8, 2022Updated 3 years ago
- Analysis of Single Cell Expression, Normalization and Differential expression☆13Feb 29, 2020Updated 6 years ago