LiuzLab / AI_MARRVELLinks
AI-MARRVEL (AIM) is an AI system for rare genetic disorder diagnosis
☆15Updated this week
Alternatives and similar repositories for AI_MARRVEL
Users that are interested in AI_MARRVEL are comparing it to the libraries listed below
Sorting:
- ☆116Updated last year
- Genomic Identification of Significant Targets in Cancer (GISTIC), version 2☆52Updated 3 years ago
- ☆75Updated 3 months ago
- ☆71Updated 2 years ago
- An R package to time somatic mutations☆62Updated 4 years ago
- ☆38Updated 5 years ago
- An R package for studying mutational signatures and structural variant signatures along clonal evolution in cancer.☆71Updated last year
- A quickstart tool for AmpliconArchitect. Performs all preliminary steps (alignment, CNV calling, seed interval detection) required prior …☆68Updated last month
- Analysis of subclonal copy number alterations (CNA) and loss of heterozygosity (LOH) in cancer☆97Updated 4 years ago
- cfDNApipe: A comprehensive quality control and analysis pipeline for cell-free DNA high-throughput sequencing data☆69Updated 2 years ago
- ☆21Updated 2 weeks ago
- Rocking R at UMCCR☆10Updated 4 years ago
- nextNEOpi: a comprehensive pipeline for computational neoantigen prediction☆76Updated 2 months ago
- Somatic copy number analysis using WGS paired end wholegenome sequencing☆72Updated 4 years ago
- Battenberg R package for subclonal copynumber estimation☆90Updated last month
- Probabilistic model for inferring clonal population structure from deep NGS sequencing.☆105Updated 4 years ago
- Assignment of known mutational signatures to individual samples and individual somatic mutations☆59Updated this week
- GLASS consortium☆40Updated 5 years ago
- Reference data: BED files, genes, transcripts, variations.☆83Updated 7 years ago
- Mutational signature analysis for low statistics SNV data☆64Updated last year
- ☆117Updated last year
- Public repository containing research code for the TCGA PanCanAtlas Splicing project☆42Updated 4 years ago
- Somatic copy variant caller (CNV) for next generation sequencing☆73Updated 11 months ago
- ATAC-seq snakemake pipeline☆88Updated 5 years ago
- Pipeline for the identification of extrachromosomal circular DNA (ecDNA) from Circle-seq, WGS, and ATAC-seq data that were generated from…☆32Updated 2 months ago
- Create mutation signatures from MAF's, and decompose them into Stratton signatures☆60Updated 6 years ago
- SigProfilerSingleSample allows attributing a known set of mutational signatures to an individual sample. The tool identifies the activity…☆23Updated 6 months ago
- Microsatellite Analysis for Normal-Tumor InStability☆73Updated 3 years ago
- A modular, containerized pipeline for ATAC-seq data processing☆58Updated 2 months ago
- A tool for the calculation of RNA-editing index for RNA seq data☆43Updated last year