EMSL-Computing / PeakDecoder
A workflow for metabolite identification and accurate profiling in multidimensional LC-IM-MS-DIA measurements. DOI: 10.5281/zenodo.
☆14Updated last year
Alternatives and similar repositories for PeakDecoder:
Users that are interested in PeakDecoder are comparing it to the libraries listed below
- Package to perform annotations of features from LC-MS All-ion fragmentation (AIF) metabolomics datasets☆12Updated 3 years ago
- A bioinformatic tool facilitating automated in-source fragmentation identification☆10Updated 2 years ago
- RHermes is a semi-targeted metabolomics package to deeply characterize biological and environmental samples.☆25Updated 2 weeks ago
- R-package - Automated Evaluation of Precursor Ion Purity for Mass Spectrometry Based Fragmentation in Metabolomics☆16Updated 11 months ago
- ☆25Updated last year
- Python pipeline for metabolomics data preprocessing, QC, standardization and annotation☆14Updated 4 months ago
- Metabolome Annotation Workflow☆25Updated last year
- Scalable and self-optimizing processing workflow for untargeted LC-MS☆28Updated 8 months ago
- ☆9Updated 7 months ago
- A Pipeline for LC-MS/MS Metabolomics Data Process and Analysis☆13Updated last week
- MetEx is a tool to extract and annotate metabolites from liquid chromatography–mass spectrometry data.☆16Updated last year
- A collection of common mz values found in mass spectrometry.☆19Updated 9 months ago
- ☆11Updated 2 years ago
- a deep learning-based retention time alignment tool for large cohort LC-MS data analysis☆11Updated last year
- metabolite identification R-package for metabolomic high-resolution LC-MS datasets.☆14Updated 7 years ago
- ☆20Updated last year
- Streamlining Mass Spectrometry Data Visualization with Pandas☆14Updated 2 weeks ago
- TimsR: Easy access to timsTOF Pro data from R.☆9Updated 3 years ago
- HUMOS is a web application aimed to help teaching Orbitrap mass spectrometry. HUMOS models a mass spectrum of a peptide mixture allowing …☆11Updated last month
- Spectral entropy for mass spectrometry data.☆26Updated last month
- Molecular formula discovery via bottom-up MS/MS interrogation☆13Updated 7 months ago
- MS2Query - machine learning assisted library querying of MS/MS spectra☆44Updated 6 months ago
- R Package for Systematic Optimization of Metabolomic Data Processing☆17Updated last week
- Metabolomics software for database-assisted deconvolution of MS/MS spectra☆18Updated last year
- Bottom-up MS/MS interrogation & Experiment-specific global annotation☆28Updated 3 months ago
- A package to cluster and visualise MS/MS spectral data☆11Updated 4 years ago
- FBMN-STATS: A hitchhiker's guide to statistical analysis of Feature-based Molecular Networks☆36Updated last month
- Intrinsic Peak Analysis (IPA) pipeline for peak-picking in large-scale untargeted small molecule analysis including metabolomics, lipidom…☆13Updated last year
- Untargeted metabolomics workflow for data processing and analysis written in Jupyter notebooks (Python)☆18Updated 5 months ago
- R package for optimized LC-MS spectra processing☆25Updated 4 months ago