A workflow for metabolite identification and accurate profiling in multidimensional LC-IM-MS-DIA measurements. DOI: 10.5281/zenodo.
☆16Apr 25, 2023Updated 3 years ago
Alternatives and similar repositories for PeakDecoder
Users that are interested in PeakDecoder are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- metabolomics/lipidomics data processing☆10Feb 17, 2021Updated 5 years ago
- Mass spectral library manager☆13Apr 9, 2020Updated 6 years ago
- ☆30Feb 9, 2024Updated 2 years ago
- Intrinsic Peak Analysis (IPA) pipeline for peak-picking in large-scale untargeted small molecule analysis including metabolomics, lipidom…☆16Jun 1, 2023Updated 3 years ago
- ☆12Jan 16, 2025Updated last year
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- ☆39Mar 16, 2026Updated 2 months ago
- Knowledge-guided multilayer network approach is executed in MetDNA2☆16Nov 5, 2022Updated 3 years ago
- Python pipeline for metabolomics data preprocessing, QC, standardization and annotation☆19Mar 26, 2026Updated 2 months ago
- ☆28Nov 30, 2023Updated 2 years ago
- a deep learning-based retention time alignment tool for large cohort LC-MS data analysis☆15Dec 6, 2023Updated 2 years ago
- The Mass Spec Query Language (MassQL) is a domain specific language meant to be a succinct way to express a query in a mass spectrometry …☆57Apr 23, 2026Updated last month
- Untargeted metabolomics workflow for data processing and analysis written in Jupyter notebooks (Python)☆24Nov 11, 2024Updated last year
- Deep-Learning-Based Multivariate Curve Resolution☆14Oct 14, 2021Updated 4 years ago
- GC/LC-MS data analysis for environmental science☆17Apr 9, 2026Updated last month
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- RHermes is a semi-targeted metabolomics package to deeply characterize biological and environmental samples.☆29May 22, 2026Updated 2 weeks ago
- ☆30Jul 30, 2024Updated last year
- MS2Tox is a machine learning tool for predicting ecotoxicity of unidentified chemicals in water by nontarget LC/HRMS☆16Jan 8, 2026Updated 5 months ago
- Rocker image for metabolomics data analysis☆13Oct 25, 2025Updated 7 months ago
- DeepMASS2 is a cross-platform GUI software tool, which enables deep-learning based metabolite annotation via semantic similarity analysis…☆14Jan 22, 2026Updated 4 months ago
- ☆12Feb 5, 2024Updated 2 years ago
- Deep learning-based pseudo mass spectrometry imaging☆14Jul 2, 2022Updated 3 years ago
- Implementation of graph convolutional networks to predict chromatographic retention times.☆15Sep 7, 2021Updated 4 years ago
- Create .mzML files through the R Console☆12May 29, 2026Updated last week
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- R package for optimized LC-MS spectra processing☆29May 18, 2026Updated 3 weeks ago
- CoreMS is a comprehensive mass spectrometry software framework☆65Apr 30, 2026Updated last month
- PyMassSpec extension for searching mass spectra using NIST's Mass Spectrum Search Engine.☆23May 19, 2026Updated 2 weeks ago
- High level functionality to support and simplify metabolomics data annotation.☆20Mar 19, 2026Updated 2 months ago
- ☆20Jul 12, 2023Updated 2 years ago
- A "fairly fast" ISOtope PAttern Calculator for Python☆13Sep 27, 2023Updated 2 years ago
- Efficiently predicting high resolution mass spectra with graph neural networks☆32Aug 3, 2023Updated 2 years ago
- ☆10Oct 23, 2024Updated last year
- Old development repository (outdated)☆14Aug 27, 2018Updated 7 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- a python package for molecular formula analysis in MS-based small molecule studies☆35Jan 28, 2026Updated 4 months ago
- A repository for physico-chemical data extracted from the NIST Chemistry WebBook☆18May 20, 2026Updated 2 weeks ago
- Metabolome Annotation Workflow☆26Oct 31, 2025Updated 7 months ago
- Large-scale tandem mass spectrum clustering using fast nearest neighbor searching.☆36Feb 12, 2026Updated 3 months ago
- Package for analyzing MS with Python☆10Jan 11, 2018Updated 8 years ago
- Molecular formula discovery via bottom-up MS/MS interrogation☆13Sep 4, 2024Updated last year
- ☆18Updated this week