EMSL-Computing / PeakDecoderLinks
A workflow for metabolite identification and accurate profiling in multidimensional LC-IM-MS-DIA measurements. DOI: 10.5281/zenodo.
☆16Updated 2 years ago
Alternatives and similar repositories for PeakDecoder
Users that are interested in PeakDecoder are comparing it to the libraries listed below
Sorting:
- Scalable and self-optimizing processing workflow for untargeted LC-MS☆30Updated last year
- A Bioconductor R package - Automated Evaluation of Precursor Ion Purity for Mass Spectrometry Based Fragmentation in Metabolomics☆16Updated last year
- RHermes is a semi-targeted metabolomics package to deeply characterize biological and environmental samples.☆28Updated 6 months ago
- Metabolomics software for database-assisted deconvolution of MS/MS spectra☆19Updated last year
- A Pipeline for LC-MS/MS Metabolomics Data Process and Analysis☆15Updated last week
- Metabolome Annotation Workflow☆26Updated last month
- Python pipeline for metabolomics data preprocessing, QC, standardization and annotation☆16Updated this week
- Peak detection for untargeted metabolomics using Neural Network. High-level API based on peakonly by @Arseha.☆17Updated last year
- A bioinformatic tool facilitating automated in-source fragmentation identification☆10Updated 3 years ago
- ☆26Updated 2 years ago
- IsoCor: Isotope Correction for mass spectrometry labeling experiments☆25Updated 7 months ago
- A collection of common mz values found in mass spectrometry.☆20Updated last year
- MetEx is a tool to extract and annotate metabolites from liquid chromatography–mass spectrometry data.☆19Updated 2 years ago
- ☆11Updated last year
- DeepMASS2 is a cross-platform GUI software tool, which enables deep-learning based metabolite annotation via semantic similarity analysis…☆12Updated 2 weeks ago
- pathway and network analysis for metabolomics☆43Updated last week
- TimsR: Easy access to timsTOF Pro data from R.☆12Updated 4 years ago
- Package to perform annotations of features from LC-MS All-ion fragmentation (AIF) metabolomics datasets☆13Updated this week
- NeatMS is an open source python package for untargeted LCMS signal labelling and filtering.☆33Updated 4 years ago
- MS2Tox is a machine learning tool for predicting ecotoxicity of unidentified chemicals in water by nontarget LC/HRMS☆16Updated 3 weeks ago
- Collisional cross-section prediction for modified and multiconformational peptides☆13Updated 4 months ago
- A global network optimization approach for untargeted LC-MS metabolomics data annotation and metabolite discovery☆50Updated 2 years ago
- R Package for Systematic Optimization of Metabolomic Data Processing☆17Updated 8 months ago
- HUMOS is a web application aimed to help teaching Orbitrap mass spectrometry. HUMOS models a mass spectrum of a peptide mixture allowing …☆11Updated 8 months ago
- Intrinsic Peak Analysis (IPA) pipeline for peak-picking in large-scale untargeted small molecule analysis including metabolomics, lipidom…☆15Updated 2 years ago
- ☆12Updated 3 years ago
- ☆14Updated 2 years ago
- Knowledge-guided multilayer network approach is executed in MetDNA2☆16Updated 3 years ago
- GLEAMS is a Learned Embedding for Annotating Mass Spectra.☆26Updated 2 years ago
- Untargeted metabolomics workflow for data processing and analysis written in Jupyter notebooks (Python)☆23Updated last year