Philipbear / BUDDY_MetabolomicsLinks
Molecular formula discovery via bottom-up MS/MS interrogation
☆14Updated last year
Alternatives and similar repositories for BUDDY_Metabolomics
Users that are interested in BUDDY_Metabolomics are comparing it to the libraries listed below
Sorting:
- a python package for molecular formula analysis in MS-based small molecule studies☆31Updated 2 months ago
- FBMN-STATS: A hitchhiker's guide to statistical analysis of Feature-based Molecular Networks☆39Updated 3 months ago
- A workflow for metabolite identification and accurate profiling in multidimensional LC-IM-MS-DIA measurements. DOI: 10.5281/zenodo.☆16Updated 2 years ago
- MS2Query - machine learning assisted library querying of MS/MS spectra☆48Updated 4 months ago
- A global network optimization approach for untargeted LC-MS metabolomics data annotation and metabolite discovery☆47Updated 2 years ago
- Hierarchical orderings for mass spectrometry data. Canonically pronounced "chemis-tree".☆30Updated 2 years ago
- Using MASST or fastMASST, adding metadata onto a tree ontology for microbes☆21Updated last week
- Python pipeline for metabolomics data preprocessing, QC, standardization and annotation☆15Updated last month
- asari, metabolomics data preprocessing☆54Updated last week
- A Bioconductor R package - Automated Evaluation of Precursor Ion Purity for Mass Spectrometry Based Fragmentation in Metabolomics☆15Updated last year
- RHermes is a semi-targeted metabolomics package to deeply characterize biological and environmental samples.☆28Updated 4 months ago
- ☆16Updated 3 years ago
- Metabolome Annotation Workflow☆25Updated last year
- Untargeted metabolomics workflow for data processing and analysis written in Jupyter notebooks (Python)☆22Updated 11 months ago
- Realtime quality control for mass spectrometry data acquisition☆18Updated 11 months ago
- GLEAMS is a Learned Embedding for Annotating Mass Spectra.☆26Updated 2 years ago
- MS/MS prediction for peptides☆24Updated 4 years ago
- NeatMS is an open source python package for untargeted LCMS signal labelling and filtering.☆33Updated 4 years ago
- ☆25Updated last year
- Bottom-up MS/MS interrogation & Experiment-specific global annotation☆30Updated 9 months ago
- A package to cluster and visualise MS/MS spectral data☆11Updated 4 years ago
- Spectral entropy for mass spectrometry data.☆32Updated last week
- Search spectral library with entropy similarity☆20Updated 5 months ago
- Transformer deep learning model for de novo sequencing of data-independent acquisition mass spectrometry data☆24Updated 7 months ago
- ☆21Updated 2 years ago
- A Pipeline for LC-MS/MS Metabolomics Data Process and Analysis☆14Updated this week
- MS²PIP: Fast and accurate peptide spectrum prediction for multiple fragmentation methods, instruments, and labeling techniques.☆47Updated 6 months ago
- Large-scale tandem mass spectrum clustering using fast nearest neighbor searching.☆33Updated last month
- Analysis platform for large-scale dose-dependent data☆25Updated last week
- HUMOS is a web application aimed to help teaching Orbitrap mass spectrometry. HUMOS models a mass spectrum of a peptide mixture allowing …☆11Updated 7 months ago