This repo contains tutorials and data for the workshop on phylogenetic methods being delivered at the 2019 Evolution conference in Providence, Rhode Island
☆14Jun 26, 2019Updated 6 years ago
Alternatives and similar repositories for Evolution-2019-Phylogenetic-Methods-Workshop
Users that are interested in Evolution-2019-Phylogenetic-Methods-Workshop are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Mycobacterium tuberculosis genomic analysis from Nanopore sequencing data☆14Jun 12, 2024Updated last year
- ☆11Nov 21, 2025Updated 4 months ago
- Repositorio de apuntes y código del curso Introducción a la bioinformática e investigación reproducible para análisis genéticos del semes…☆12Jun 1, 2017Updated 8 years ago
- Measuring disparity with R☆29Mar 9, 2026Updated 2 weeks ago
- Plot genome alignment figure using progressiveMauve & genoPlotR☆22Aug 5, 2022Updated 3 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Evolutionary Individual based modelling, mathematically grounded.☆13Mar 25, 2022Updated 4 years ago
- Bayesian estimation of the evolutionary rate matrix.☆10Dec 8, 2025Updated 3 months ago
- Links for Ecology and Evolution☆23Jul 15, 2019Updated 6 years ago
- Page for Workshop, "An Ecologist's Introduction to Data Science", presented at ESA/CSEE 2022 and for SORTEE☆10Nov 17, 2022Updated 3 years ago
- phylogenetic comparative method☆11Jan 9, 2026Updated 2 months ago
- Increased efficiency in identifying mixed pollen samples by meta-barcoding with a dual-indexing approach - Computational methods☆10Jan 19, 2022Updated 4 years ago
- Assign genotypes to Salmonella Paratyphi A isolates using their whole-genome data.☆10Mar 6, 2025Updated last year
- Tools for ecological niche evolution assessment considering uncertainty☆15Mar 10, 2023Updated 3 years ago
- 🔬🐛 Rapid 16s rRNA identification from isolate FASTQ files☆25Apr 24, 2018Updated 7 years ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- Toolkit for preparing genomes for submission to NCBI☆29Sep 6, 2021Updated 4 years ago
- Intra-species bacterial contamination detection☆25Feb 5, 2026Updated last month
- Some code to visualize your iNaturalist data.☆11Apr 6, 2021Updated 4 years ago
- phylogenetics tools for linux (and other mostly posix compliant) computers☆123Jan 17, 2025Updated last year
- Code for Informatics nano course☆11Jan 20, 2020Updated 6 years ago
- NCBI Pathogen Detection Portal toolkit☆11Sep 6, 2023Updated 2 years ago
- ☆13Nov 12, 2025Updated 4 months ago
- Multivariate vIsualisatioN and OuTlier Analysis Using R☆14Apr 8, 2023Updated 2 years ago
- Phylommand is a software package to create, manipulate, and/or analyze phylogenetic trees or pairwise alignments.☆11Sep 5, 2024Updated last year
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- REBIPP: Plant-Pollinator Interactions Data Vocabulary☆32Apr 1, 2025Updated 11 months ago
- circos pipeline☆20May 8, 2021Updated 4 years ago
- A tool for concatenating multiple fasta alignments for supermatrix phylogenetic analyses☆24Mar 7, 2025Updated last year
- This repo contains the code for a shiny app that allows for visualization of subset phylogenetic trees☆15Jan 9, 2019Updated 7 years ago
- Examples of application of comparative methods in R☆60Oct 3, 2022Updated 3 years ago
- NichePy: a collection of Python scripts for estimating overlap of ecological niche and species distribution models.☆15Dec 5, 2011Updated 14 years ago
- NovelTree is a highly parallelized and computationally efficient phylogenomic workflow that infers gene families, gene family trees, spec…☆23Updated this week
- Orthology prediction using a graph-based, reciprocal approach with profile hidden Markov models☆33Jan 7, 2022Updated 4 years ago
- Harmonization of AMR predictor tool outputs☆25Jan 14, 2025Updated last year
- NordVPN Threat Protection Pro™ • AdTake your cybersecurity to the next level. Block phishing, malware, trackers, and ads. Lightweight app that works with all browsers.
- A pipeline to investigate horizontal gene transfer from NGS data☆26Nov 20, 2025Updated 4 months ago
- Deprecated - LeafMachine is a GUI that autonomously extracts leaf trait data from herbarium vouchers using CNNs, SVMs, and CV algorithms.…☆15May 2, 2023Updated 2 years ago
- Visualize whole genome alignments as linear maps☆74Updated this week
- Find Best SLURM Partition to Run a Job☆14Oct 20, 2023Updated 2 years ago
- Course repository for Methods in Biodiversity Analysis☆23Jun 6, 2025Updated 9 months ago
- TADA - Targeted Amplicon Diversity Analysis - a DADA2-focused Nextflow workflow for any targeted amplicon region☆22Mar 13, 2026Updated 2 weeks ago
- ☆40Sep 14, 2016Updated 9 years ago