griffithlab / rnaseq_tutorial_wikiLinks
The wiki repo, with pull request enabled, for the rnaseq_tutorial
☆26Updated 5 years ago
Alternatives and similar repositories for rnaseq_tutorial_wiki
Users that are interested in rnaseq_tutorial_wiki are comparing it to the libraries listed below
Sorting:
- Bioinformatics analysis scripts, workflows, general code examples☆53Updated 4 years ago
- Materials for Spring 2018 Applied Genomics Course☆79Updated 6 years ago
- RNAseq pipeline based on snakemake☆26Updated 2 years ago
- A Nextflow-based pipeline for comprehensive analyses of long non-coding RNAs from RNA-seq datasets☆83Updated 2 years ago
- Documenting usage and experience with bioinformatic tools☆40Updated 9 years ago
- For biological deep sequencing data. Decompose a UCSC knownGenes/Ensembl GTF file into transcript regions (i.e. exons, introns, UTRs and…☆35Updated 2 years ago
- materials for the RNA-Seq workshop on Trinity and Tuxedo, covering de novo and genome-guided transcript assembly and downstream analysis.☆48Updated 8 years ago
- FEELnc : FlExible Extraction of LncRNA☆90Updated last month
- ☆78Updated 11 years ago
- Issue tracker for the Biostar Handbook☆63Updated 3 years ago
- ☆50Updated 4 years ago
- Tool for RNA-Seq analysis.☆39Updated 3 years ago
- Unsorted scripts for bioinformatics☆61Updated 4 years ago
- A small-RNA sequencing analysis pipeline☆89Updated 2 months ago
- Student website repo for 2015/2016 Canadian Bioinformatics Workshops☆34Updated 2 years ago
- A pipeline for differential expression and differential alternative splicing analysis☆66Updated last year
- Exome/Capture/RNASeq Pipeline Implementation using snakemake☆47Updated 7 years ago
- ☆29Updated 5 years ago
- ☆62Updated 8 years ago
- My bioinfo toolbox☆50Updated 6 months ago
- csf fork of fastqc for usage on selected reads of unaligned bam file☆48Updated 12 years ago
- Benchmarking of aligners and variant callers for Whole Exome Sequencing data☆19Updated 6 years ago
- SeqMonk NGS visualisation and analysis tool☆49Updated 2 months ago
- B-cell and T-cell Adaptive Immune Receptor Repertoire (AIRR) sequencing analysis pipeline using the Immcantation framework☆67Updated 3 weeks ago
- Workflows for germline short variant discovery in WGS data. PairedEndSingleSampleWf has been superseded in Broad production by https://gi…☆56Updated 5 years ago
- Automatically exported from code.google.com/p/ea-utils☆96Updated 2 years ago
- HPC based pipelines for variant calling using GATK☆17Updated 5 years ago
- Do not use - please refer to our newest code: https://github.com/cgat-developers/cgat-apps☆124Updated 6 years ago
- Haplotype, isoform and gene level expression analysis using multi-mapping RNA-seq reads☆68Updated last year
- GFF3sort: A Perl Script to sort gff3 files and produce suitable results for tabix tools☆50Updated 5 years ago