smiles724 / GGNN_Meets_PLM
☆21Updated 2 years ago
Alternatives and similar repositories for GGNN_Meets_PLM:
Users that are interested in GGNN_Meets_PLM are comparing it to the libraries listed below
- ☆22Updated last month
- ☆35Updated last year
- ☆83Updated 5 months ago
- Implementation of PocketXMol, the pocket-interacting molecular generative foundation model.☆25Updated 2 months ago
- Rotamer Density Estimator is an Unsupervised Learner of the Effect of Mutations on Protein-Protein Interaction (ICLR 2023)☆57Updated 9 months ago
- Reaction-Conditioned Virtual Screening of Enzymes☆29Updated 3 months ago
- BioLiP2 database curation and web interface☆23Updated last month
- Sequence-Structure-Surface Model for Protein Fitness Prediction (S3F)☆30Updated 3 months ago
- Official implementation of Generative Diffusion Models for Antibody Design, Docking, and Optimization.☆57Updated last year
- ☆66Updated last year
- ☆105Updated last year
- Multi-Scale Representation Learning on Proteins (NeurIPS 2021)☆47Updated last year
- Pretrainable geometric graph neural network for antibody affinity maturation☆48Updated 7 months ago
- Learning to design protein-protein interactions with enhanced generalization (ICLR 2024)☆47Updated 2 months ago
- [ICLR2025] Official Implementation of IgGM: A Generative Model for Functional Antibody and Nanobody Design☆56Updated last week
- Official Implemetation of ConfDiff (ICML'24) - Protein Conformation Generation via Force-Guided SE(3) Diffusion Models☆49Updated 6 months ago
- This repo contains the codes for our paper "End-to-End Full-Atom Antibody Design"☆102Updated 3 weeks ago
- Code for humanization of antibody and nanobody☆36Updated 3 months ago
- 🧬 Fusion of protein sequence and structural information, using denoising pre-training network for zero-shot protein engineering (eLife 2…☆54Updated 2 months ago
- Codes for our paper "Full-Atom Peptide Design with Geometric Latent Diffusion" (NeurIPS 2024)☆50Updated 2 weeks ago
- Predicting mutational effects on protein-protein binding via a side-chain diffusion probabilistic model (NeurIPS 2023 Poster)☆34Updated last year
- Evaluating Protein Binding Interfaces with Transformer Networks☆44Updated last year
- ☆81Updated 2 years ago
- Official repository of GENzyme☆45Updated 3 months ago
- This repo contains the codes for our paper "Generalist Equivariant Transformer Towards 3D Molecular Interaction Learning" (ICML 2024).☆29Updated 6 months ago
- ESM-GearNet for Protein Structure Representation Learning (https://arxiv.org/abs/2303.06275)☆86Updated last year
- ☆47Updated 9 months ago
- Diffusion model based protein-ligand flexible docking method☆101Updated 4 months ago
- Pro-FSFP: Few-Shot Protein Fitness Prediction☆75Updated 2 months ago