gijzelaerr / kliko

Related projects: ⓘ

• sjackman / docker-linuxbrew
  Defunct. Use https://github.com/Linuxbrew/docker
  ☆14Updated 8 years ago
• common-workflow-library / legacy
  Deprecated
  ☆100Updated 5 years ago
• BD2KGenomics / cgcloud
  Image and VM management for Jenkins, Spark and Mesos clusters in EC2
  ☆22Updated 4 years ago
• dmlond / docker_bwa_aligner
  Docker containers that demonstrate a proof of concept bwa alignment workflow
  ☆14Updated 9 years ago
• CampagneLaboratory / NextflowWorkbench
  An implementation of Nextflow.io with Language Workbench Technology. The project helps create computational pipelines that run with the N…
  ☆22Updated 8 years ago
• SciDAP / scidap
  ☆18Updated this week
• StanfordBioinformatics / loom
  A tool for running bioinformatics workflows locally or in the cloud.
  ☆29Updated 4 years ago
• alastair-droop / qsubsec
  Simple tokenised template system for SGE
  ☆10Updated last year
• Novartis / yap
  High throughput, pain-free big data pipelines.
  ☆30Updated 7 years ago
• wurmlab / oswitch
  Provides access to complex Bioinformatics software (even BioLinux!) in just one command.
  ☆76Updated 7 years ago
• common-workflow-lab / python-cwlgen
  Generation of CWL programmatically. Available types: CommandLineTool and DockerRequirement
  ☆29Updated 4 years ago
• BioContainers / mulled
  Mulled - Automatized Containerized Software Repository
  ☆65Updated 6 months ago
• pcingola / BigDataScript
  BigDataScript: Scirpting language for big data
  ☆92Updated 3 years ago
• hexylena / argparse2tool
  transparently build CWL and Galaxy XML tool definitions for any script that uses argparse
  ☆26Updated 2 years ago
• yvdriess / precipes
  Parallel Recipes : parallel workflow execution made easy
  ☆13Updated 9 years ago
• dzerbino / ascii_plots
  Convenience function for quick and dirty data analysis
  ☆68Updated 6 years ago
• involucro / involucro
  Build and Deliver Software with Containers
  ☆32Updated 3 years ago
• NLeSC / scriptcwl
  Create cwl workflows by writing a simple Python script
  ☆40Updated 4 years ago
• rabix / rabix
  [Historical] Reproducible Analyses for Bioinformatics
  ☆106Updated 5 years ago
• common-workflow-language / workflow-service
  Implementation of the GA4GH Workflow Execution Service, a REST service for running workflows
  ☆36Updated 2 months ago
• wormtable / wormtable
  Write-once-read-many table for large datasets.
  ☆28Updated 11 months ago
• BioInterchange / Ontologies
  Home of the Genomic Feature and Variation Ontology (GFVO)
  ☆16Updated 3 years ago
• pygridtools / drmaa-python
  Python wrapper around the C DRMAA library.
  ☆109Updated 5 years ago
• MG-RAST / Shock
  An object store for scientific data
  ☆51Updated 3 years ago
• mattmight / calculendar
  A command line tool that uses a Boolean calculus of calendars for computing availability (currently supports Google Calendar API)
  ☆25Updated 2 years ago
• antonkulaga / cromwell-client
  Client for the Cromwell workflow engine
  ☆17Updated 6 months ago
• ga4gh / task-execution-server
  ☆11Updated 7 years ago
• gwforg / gwf
  A flexible, pragmatic workflow tool.
  ☆31Updated 2 months ago
• ga4gh / tool-registry-service-schemas
  APIs for discovering genomics tools, their metadata and their containers
  ☆30Updated 3 months ago