☆10May 29, 2023Updated 3 years ago
Alternatives and similar repositories for nextflow-course
Users that are interested in nextflow-course are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Nextflow + Docker tutorial material☆25Oct 24, 2017Updated 9 years ago
- Scientific Compute Container Specification and Support Library☆12Jan 12, 2017Updated 9 years ago
- This pipeline has moved! Please see:☆11Mar 12, 2018Updated 8 years ago
- Pipeline for poreathon☆14Dec 17, 2014Updated 11 years ago
- Docker images of bioinformatics software☆21Jun 15, 2017Updated 9 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- GEMTools main repository☆17Jun 21, 2022Updated 4 years ago
- Scripts used for the Differential NicheNet analyses in the Liver Atlas paper Guilliams et al., Cell 2022☆10Jan 12, 2022Updated 4 years ago
- Assembly and intrahost / low-frequency variant calling for viral samples☆15Feb 12, 2020Updated 6 years ago
- A way to track my readings☆13Sep 3, 2026Updated last month
- DEPRECIATED! Please use nf-core/tools instead☆19Aug 8, 2018Updated 8 years ago
- Nextflow basic tutorial for newbie users☆34Jun 17, 2018Updated 8 years ago
- A fast parallel GFF3 parser☆15Jan 25, 2013Updated 13 years ago
- Flexible circular visualization of genome-associated data with BioPerl and SVG.☆47Jun 18, 2019Updated 7 years ago
- Interactive single cell RNA-seq analysis webserver!☆10Mar 15, 2023Updated 3 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- ☆15Apr 2, 2025Updated last year
- Automatized Polygenic Score Prediction☆10Sep 21, 2026Updated last month
- Identification of differentially methylated genes in biomedical data☆15Jan 26, 2026Updated 9 months ago
- A user-friendly R pipeline for biomarker discovery in single-cell transcriptomics☆14Jan 9, 2026Updated 9 months ago
- ☆12May 31, 2023Updated 3 years ago
- R code for metaanalysis of single cell liver data☆12Feb 1, 2021Updated 5 years ago
- Benchmarking computational doublet-detection methods for single-cell RNA sequencing data☆10Feb 25, 2021Updated 5 years ago
- ☆13Nov 7, 2022Updated 3 years ago
- This repository contains all code used for the Human Lung Cell Atlas project.☆61Aug 21, 2023Updated 3 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Repository of cmig_tools including FEMA☆12Oct 9, 2026Updated 2 weeks ago
- An ultra light YAML-based pipeline execution engine☆20Aug 30, 2017Updated 9 years ago
- A package containing metrics for evaluating subpopulation identification in clusterings, embeddings, graphs and space.☆11Jan 23, 2026Updated 9 months ago
- This is a repository of the scLinaX R package developed in the Tomofuji et al (Quantification of escape from X chromosome inactivation wi…☆12Sep 12, 2025Updated last year
- Workflows I find helpful for fungal genome annotation☆22Jun 30, 2023Updated 3 years ago
- OBF Google Summer of Code☆21Jan 21, 2025Updated last year
- An implementation of popular evaluation metrics that are commonly used in survival prediction including Concordance Index, Brier Score, I…☆13Sep 3, 2022Updated 4 years ago
- H3ABioNet 16S rDNA diverstity analysis package☆19May 20, 2019Updated 7 years ago
- Sanity check Variant Call Format (VCF) files.☆37Mar 18, 2016Updated 10 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- A flexible tool for the multi-resolution localization of causal variants across the genome, accounting for population structure.☆16Jul 7, 2022Updated 4 years ago
- ☆11Jul 13, 2018Updated 8 years ago
- Accurate estimation of off-target editing activity from comparative NGS data☆13Jan 22, 2024Updated 2 years ago
- **DEFUNCT** dada2-based Nextflow pipeline for multiple amplicon data. See website for up-to-date version☆20Nov 1, 2019Updated 6 years ago
- A novel management, annotation, and machine learning framework for analyzing cancer mutations☆31Jul 4, 2024Updated 2 years ago
- Raw data and analysis of scRNA Seq experiments for the paper Multimodal Mapping of the Immune Landscape in Human Pancreatic Cancer. This …☆16Nov 30, 2020Updated 5 years ago
- Genomics database manager☆25Mar 3, 2014Updated 12 years ago