A tool for drawing ROIs on videos and analysing deeplabcut videos.
☆35Apr 24, 2026Updated 4 months ago
Alternatives and similar repositories for DLC_ROI_tool
Users that are interested in DLC_ROI_tool are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- FreiPose: A Deep Learning Framework for Precise Animal Motion Capture in 3D Spaces☆18Apr 11, 2022Updated 4 years ago
- A Bonsai interface for real-time markerless pose estimation using DeepLabCut☆55Jun 1, 2025Updated last year
- A Deeplabcut network trained to label mice in open field arena with topdown view☆11Feb 21, 2021Updated 5 years ago
- Various scripts to support deeplabcut and what to do afterwards!☆164Jul 1, 2025Updated last year
- Behavioral segmentation of open field in DeepLabCut, or B-SOID ("B-side"), is a pipeline that pairs unsupervised pattern recognition with…☆217Feb 9, 2024Updated 2 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ImageJ Plugin for Flexible Atlas Segmentation Tool for Multi-Area Processing☆23Jul 4, 2022Updated 4 years ago
- Tracking of mice in novel object recognition☆11Dec 2, 2022Updated 3 years ago
- Acoustic camera system for measuring ultrasound communication in rodents☆23Jun 24, 2026Updated 2 months ago
- ☆20Apr 6, 2022Updated 4 years ago
- SimBA (Simple Behavioral Analysis), a pipeline and GUI for developing supervised behavioral classifiers☆374Updated this week
- Variational Animal Motion Embedding - A tool for time series embedding and clustering☆202Oct 3, 2024Updated last year
- Efficient cell detection in large images using cellfinder in napari☆22Jan 5, 2024Updated 2 years ago
- a module for kinematic analysis of deeplabcut outputs☆154Dec 13, 2023Updated 2 years ago
- functions for for converting data from DeepLabCut formatting to DLTdv tools or Argus format☆21Mar 2, 2023Updated 3 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Closed-loop behavioral experiment toolkit using pose estimation of body parts.☆64Jul 1, 2023Updated 3 years ago
- A python package which aligns histology to the Allen Brain Atlas and Waxholm rat atlas using deep learning.☆129Sep 8, 2026Updated 2 weeks ago
- General information, resources and dicussions for the BrainGlobe project.☆11Feb 21, 2025Updated last year
- Repository for reproducing results in Lauer et al. 2022☆22Aug 1, 2022Updated 4 years ago
- Python-based module for extracting from, converting between, and handling optical imaging data from several file formats. Inspired by Spi…☆18Updated this week
- Brainways☆25Aug 28, 2025Updated last year
- Analysis code for Easy Electrophysiology (www.easyelectrophysiology.com)☆18Mar 20, 2025Updated last year
- A Primer on Motion Capture with Deep Learning:Principles, Pitfalls and Perspectives☆22Sep 11, 2021Updated 5 years ago
- Fully automated (rodent) limb motion analysis toolbox for behavioral analysis with bodypart coordinate data, building upon markerless pos…☆20Nov 29, 2025Updated 9 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Repository for BehaviorDEPOT pipeline app files and source code☆44Jul 9, 2026Updated 2 months ago
- [eLife 2023] Code for "Contrasting action and posture coding with hierarchical deep neural network models of proprioception"☆16Dec 23, 2024Updated last year
- Universal Renderer for Neuroscience☆16Nov 4, 2025Updated 10 months ago
- A napari plugin for direct 3D cell segmentation -- taking you through training, inference, and review of masks☆124May 22, 2026Updated 4 months ago
- Build unbiased anatomical templates from individual images☆14Sep 9, 2026Updated last week
- An R toolbox for analysing movement across space and time☆11Aug 31, 2026Updated 3 weeks ago
- ☆126Updated this week
- An alpha playground for a web-based labeling tool for DLC☆16Jun 9, 2020Updated 6 years ago
- Brain flatmaps generation☆13Oct 5, 2022Updated 3 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- How to use Aligning Big Brains and Atlases with Python☆14May 3, 2023Updated 3 years ago
- UNRAVEL: UN-biased high-Resolution Analysis and Validation of Ensembles using Light sheet images☆14Updated this week
- Workshop material for using DeepLabCut☆151Jul 27, 2026Updated last month
- ☆36Aug 19, 2021Updated 5 years ago
- A python toolbox for locating and exporting brain regions from mouse brain images.☆12Oct 22, 2024Updated last year
- ☆29Oct 22, 2025Updated 11 months ago
- Registration to BrainGlobe atlases in napari using Elastix☆33Sep 11, 2026Updated last week