Alternatives and similar repositories for movement

Users that are interested in movement are comparing it to the libraries listed below

• dattalab / keypoint-moseq
  ☆90Updated 2 weeks ago
• neuroinformatics-unit / spikewrap
  A package to manage electrophysiology analysis.
  ☆23Updated this week
• flatironinstitute / dendro-old
  Analyze neuroscience data in the cloud
  ☆18Updated 9 months ago
• brainglobe / brainglobe-atlasapi
  A Python interface to access neuroanatomical atlases
  ☆153Updated this week
• flatironinstitute / neurosift
  Browser-based NWB visualization and DANDI exploration
  ☆58Updated this week
• denisecailab / minian
  miniscope analysis pipeline with interactive visualizations
  ☆93Updated 11 months ago
• SchwarzNeuroconLab / DeepLabStream
  Closed-loop behavioral experiment toolkit using pose estimation of body parts.
  ☆58Updated last year
• catalystneuro / neuroconv
  Create NWB files by converting and combining neural data in proprietary formats and adding essential metadata.
  ☆61Updated this week
• neuroethology / bentoMAT
  A gui for browsing joint calcium imaging + behavioral data.
  ☆51Updated 5 months ago
• petersaj / neuropixels_trajectory_explorer
  Neuropixels trajectory explorer with the Allen CCF mouse atlas
  ☆74Updated 2 months ago
• EthoML / VAME
  Variational Animal Motion Embedding - A tool for time series embedding and clustering
  ☆28Updated 3 weeks ago
• zivlab / CellReg
  Registration of cells across sessions.
  ☆75Updated 10 months ago
• Julie-Fabre / awesome_neuropixels
  A curated list of awesome Neuropixels resources.
  ☆106Updated this week
• RichieHakim / ROICaT
  Region Of Interest Classification and Tracking
  ☆19Updated this week
• VirtualBrainLab / Pinpoint
  Multi-probe trajectory planning in an intuitive 3D environment
  ☆54Updated last week
• SpikeInterface / spikeinterface-dockerfiles
  Collection of spike sorters Docker files
  ☆9Updated 3 months ago
• SpikeInterface / probeinterface_library
  Collection of probe description for probeinterface
  ☆15Updated 3 months ago
• flatironinstitute / nemos
  NEural MOdelS, a statistical modeling framework for neuroscience.
  ☆100Updated this week
• AllenNeuralDynamics / aind-ephys-spikesort-kilosort25-full
  CodeOcean capsule for full electrophysiology analysis pipeline using Kilosort2.5 via SpikeInterface.
  ☆12Updated last year
• DeNardoLab / BehaviorDEPOT
  Repository for BehaviorDEPOT pipeline app files and source code
  ☆38Updated 8 months ago
• LorenFrankLab / spyglass
  Neuroscience data analysis framework for reproducible research built by Loren Frank Lab at UCSF
  ☆100Updated last week
• magland / sortingview
  Web app for viewing results of ephys spike sorting
  ☆26Updated 3 months ago
• kushalkolar / MESmerize
  Platform for Calcium Imaging analysis. DEPRECATED.
  ☆60Updated last year
• SpikeInterface / spiketutorials
  Tutorials for using SpikeInterface on extracellular datasets.
  ☆65Updated last year
• petersaj / AP_histology
  Histology processing
  ☆66Updated 2 weeks ago
• HelmchenLabSoftware / Cascade
  Calibrated inference of spiking from calcium ΔF/F data using deep networks
  ☆145Updated 3 weeks ago
• nel-lab / mesmerize-core
  High level pandas-based API for batch analysis of Calcium Imaging data using CaImAn
  ☆68Updated 3 weeks ago
• int-brain-lab / ibllib
  IBL core shared libraries
  ☆63Updated this week
• neuroinformatics-unit / ethology
  Mix-and-match computer vision tools for your animal behaviour analysis
  ☆17Updated last week
• neuroinformatics-unit / NeuroBlueprint
  Lightweight data specification for systems neuroscience, inspired by BIDS.
  ☆19Updated this week