Alternatives and similar repositories for moseq2-app:

Users that are interested in moseq2-app are comparing it to the libraries listed below

• YttriLab / A-SOID
  An active learning platform for expert-guided, data efficient discovery of behavior.
  ☆58Updated last week
• dattalab / keypoint-moseq
  ☆86Updated last week
• DeNardoLab / BehaviorDEPOT
  Repository for BehaviorDEPOT pipeline app files and source code
  ☆36Updated 6 months ago
• ETHZ-INS / BehaviorFlow
  Code package that allows meta analyses of unsupervised behavior results
  ☆16Updated 7 months ago
• neuroethology / bentoMAT
  A gui for browsing joint calcium imaging + behavioral data.
  ☆51Updated 2 months ago
• ETHZ-INS / DLCAnalyzer
  R Scripts to analyze deep lab cut point data and related data
  ☆66Updated 2 years ago
• DeepLabCut / napari-deeplabcut
  a napari plugin for labeling and refining keypoint data within DeepLabCut projects
  ☆54Updated 3 months ago
• bermanlabemory / motionmapperpy
  Modified Python 3.0 implementation of MotionMapper (https://github.com/gordonberman/MotionMapper)
  ☆29Updated 10 months ago
• ryhattori / PatchWarp
  Image processing pipeline to correct motion artifacts and complex image distortions in neuronal calcium imaging data.
  ☆25Updated last year
• umyelab / LabGym
  Quantify user-defined behaviors.
  ☆74Updated last month
• PolarBean / DeepSlice
  A python package which aligns histology to the Allen Brain Atlas and Waxholm rat atlas using deep learning.
  ☆91Updated last week
• PolarBean / DLC_ROI_tool
  A tool for drawing ROIs on videos and analysing deeplabcut videos.
  ☆33Updated 4 years ago
• djamesbarker / pMAT
  Fiber Photometry Modular Analysis Tool Suite
  ☆38Updated 3 years ago
• petersaj / AP_histology
  Histology processing
  ☆65Updated this week
• ksseverson57 / campy
  Python package for streaming video from multiple cameras to disk. Features real-time compression and debayering using FFmpeg.
  ☆41Updated 7 months ago
• neuroethology / MARS
  End-user version of the Mouse Action Recognition System (MARS)
  ☆62Updated last year
• EthoML / VAME
  Variational Animal Motion Embedding - A tool for time series embedding and clustering
  ☆22Updated this week
• huangkang314 / Behavior-Atlas
  ☆30Updated 4 years ago
• mlfpm / deepof
  DeepLabCut based data analysis package including pose estimation and representation learning mediated behavior recognition
  ☆44Updated this week
• swanandlab / DBscorer
  Automatic Mobility Based Behavioral Quantification ( Forced Swim Test, Tail Suspension Test )
  ☆18Updated 6 months ago
• lahammond / BrainJ
  Fiji pipeline for automated serial section reconstruction and mouse brain analysis.
  ☆29Updated last year
• jessedmarshall / CAPTURE_demo
  Demo code for CAPTURE and DANNCE
  ☆28Updated 3 years ago
• PrincetonUniversity / BrainPipe
  ☆18Updated 3 years ago
• brainglobe / brainglobe-heatmap
  Rendering anatomical heatmaps with brainrender and matplotlib
  ☆40Updated last week
• fdechaumont / lmt-analysis
  Live Mouse Tracker analysis
  ☆28Updated last week
• talialerner / Photometry-Analysis-Shared
  ☆11Updated 8 years ago
• leomol / FPA
  Fiber photometry analysis
  ☆22Updated 2 weeks ago
• JingyiGF / HERBS
  ☆19Updated last year
• lwillmore / QuantifyingDefeat
  quantification of behavior across chronic social defeat stress
  ☆10Updated 2 years ago
• SchwarzNeuroconLab / DeepLabStream
  Closed-loop behavioral experiment toolkit using pose estimation of body parts.
  ☆55Updated last year