dattalab / moseq2-appLinks
MoSeq2 Jupyter Notebook platform used to run all of the MoSeq2 tools in a GUI.
☆34Updated 5 months ago
Alternatives and similar repositories for moseq2-app
Users that are interested in moseq2-app are comparing it to the libraries listed below
Sorting:
- ☆91Updated last week
- An active learning platform for expert-guided, data efficient discovery of behavior.☆59Updated last month
- R Scripts to analyze deep lab cut point data and related data☆67Updated 2 years ago
- Repository for BehaviorDEPOT pipeline app files and source code☆38Updated 9 months ago
- Variational Animal Motion Embedding - A tool for time series embedding and clustering☆190Updated 9 months ago
- Quantify user-defined behaviors.☆79Updated this week
- a module for kinematic analysis of deeplabcut outputs☆142Updated last year
- End-user version of the Mouse Action Recognition System (MARS)☆71Updated last year
- A gui for browsing joint calcium imaging + behavioral data.☆52Updated 5 months ago
- PyRat is a user friendly library in python to analyze data from the DeepLabCut. Developed to help researchers unfamiliar with programming…☆49Updated last year
- Histology processing☆66Updated last month
- a napari plugin for labeling and refining keypoint data within DeepLabCut projects☆56Updated 6 months ago
- A python package which aligns histology to the Allen Brain Atlas and Waxholm rat atlas using deep learning.☆98Updated 3 weeks ago
- Guided Photometry Analysis in Python, a free and open-source FP analysis tool.☆75Updated 4 months ago
- Behavioral segmentation of open field in DeepLabCut, or B-SOID ("B-side"), is a pipeline that pairs unsupervised pattern recognition with…☆198Updated last year
- ☆19Updated last year
- Various scripts to support deeplabcut and what to do afterwards!☆155Updated 2 weeks ago
- ☆52Updated 10 months ago
- Variational Animal Motion Embedding - A tool for time series embedding and clustering☆29Updated 2 weeks ago
- Code package that allows meta analyses of unsupervised behavior results☆16Updated last month
- Registration of cells across sessions.☆75Updated 10 months ago
- A tool for drawing ROIs on videos and analysing deeplabcut videos.☆33Updated 4 years ago
- Modified Python 3.0 implementation of MotionMapper (https://github.com/gordonberman/MotionMapper)☆29Updated last month
- Framework for predicting neural activity from mouse orofacial movements tracked using a pose estimation model. Package also includes sing…☆169Updated 3 months ago
- DLC2Action is an action segmentation package that makes running and tracking of machine learning experiments easy.☆25Updated last year
- Platform for Calcium Imaging analysis. DEPRECATED.☆61Updated last year
- Image processing pipeline to correct motion artifacts and complex image distortions in neuronal calcium imaging data.☆26Updated last year
- Calibrated inference of spiking from calcium ΔF/F data using deep networks☆147Updated last month
- DeepLabCut based data analysis package including pose estimation and representation learning mediated behavior recognition☆45Updated 2 weeks ago
- Multi-probe trajectory planning in an intuitive 3D environment☆55Updated this week