pyratlib / pyrat
PyRat is a user friendly library in python to analyze data from the DeepLabCut. Developed to help researchers unfamiliar with programming can perform animal behavior analysis more simpler.
☆47Updated 10 months ago
Alternatives and similar repositories for pyrat:
Users that are interested in pyrat are comparing it to the libraries listed below
- Code package that allows meta analyses of unsupervised behavior results☆16Updated 6 months ago
- R Scripts to analyze deep lab cut point data and related data☆66Updated 2 years ago
- Repository for BehaviorDEPOT pipeline app files and source code☆36Updated 4 months ago
- Automatic Mobility Based Behavioral Quantification ( Forced Swim Test, Tail Suspension Test )☆18Updated 4 months ago
- DeepLabCut based data analysis package including pose estimation and representation learning mediated behavior recognition☆42Updated this week
- An active learning platform for expert-guided, data efficient discovery of behavior.☆56Updated last week
- A tool for drawing ROIs on videos and analysing deeplabcut videos.☆32Updated 4 years ago
- ☆84Updated last week
- Variational Animal Motion Embedding - A tool for time series embedding and clustering☆20Updated this week
- Quantify user-defined behaviors.☆74Updated this week
- a module for kinematic analysis of deeplabcut outputs☆138Updated last year
- ☆19Updated last year
- a napari plugin for labeling and refining keypoint data within DeepLabCut projects☆54Updated last month
- A gui for browsing joint calcium imaging + behavioral data.☆51Updated last month
- Configurable acquisition from multiple FLIR/Point Grey camera using Bonsai and Python to h264 compress the video on the GPU.☆13Updated 2 years ago
- Free, platform independent, behavior tracking software.☆127Updated 8 months ago
- Fiber Photometry Modular Analysis Tool Suite☆36Updated 3 years ago
- End-user version of the Mouse Action Recognition System (MARS)☆60Updated 11 months ago
- MoSeq2 Jupyter Notebook platform used to run all of the MoSeq2 tools in a GUI.☆34Updated last month
- Closed-loop behavioral experiment toolkit using pose estimation of body parts.☆53Updated last year
- DLC2Action is an action segmentation package that makes running and tracking of machine learning experiments easy.☆24Updated 11 months ago
- Demo code for CAPTURE and DANNCE☆27Updated 3 years ago
- Fiber photometry analysis☆22Updated 2 months ago
- ☆52Updated 6 months ago
- ☆102Updated last month
- ☆30Updated 3 years ago
- Modified Python 3.0 implementation of MotionMapper (https://github.com/gordonberman/MotionMapper)☆28Updated 9 months ago
- Search Strategy analysis and more for spatial navigation data in rodents☆28Updated 9 months ago
- quantification of behavior across chronic social defeat stress☆10Updated 2 years ago