umyelab / LabGym

Related projects ⓘ

Alternatives and complementary repositories for LabGym

• DeNardoLab / BehaviorDEPOT
  Repository for BehaviorDEPOT pipeline app files and source code
  ☆35Updated last month
• dattalab / keypoint-moseq
  ☆77Updated last week
• YttriLab / A-SOID
  An active learning platform for expert-guided, data efficient discovery of behavior.
  ☆55Updated 5 months ago
• djamesbarker / pMAT
  Fiber Photometry Modular Analysis Tool Suite
  ☆34Updated 3 years ago
• ETHZ-INS / DLCAnalyzer
  R Scripts to analyze deep lab cut point data and related data
  ☆61Updated last year
• DeepLabCut / napari-deeplabcut
  a napari plugin for labeling and refining keypoint data within DeepLabCut projects
  ☆52Updated 3 weeks ago
• mlfpm / deepof
  DeepLabCut based data analysis package including pose estimation and representation learning mediated behavior recognition
  ☆39Updated 2 weeks ago
• AdaptiveMotorControlLab / DLC2Kinematics
  a module for kinematic analysis of deeplabcut outputs
  ☆134Updated 11 months ago
• ThomasAkam / Point_Grey_Bonsai_multi_camera_acquisition
  Configurable acquisition from multiple FLIR/Point Grey camera using Bonsai and Python to h264 compress the video on the GPU.
  ☆13Updated last year
• neuroethology / bentoMAT
  A gui for browsing joint calcium imaging + behavioral data.
  ☆50Updated 3 months ago
• swanandlab / DBscorer
  Automatic Mobility Based Behavioral Quantification ( Forced Swim Test, Tail Suspension Test )
  ☆14Updated last month
• leomol / FPA
  Fiber photometry analysis
  ☆19Updated 3 weeks ago
• ryhattori / PatchWarp
  Image processing pipeline to correct motion artifacts and complex image distortions in neuronal calcium imaging data.
  ☆24Updated 11 months ago
• Whitlock-Group / HERBS
  ☆51Updated 2 months ago
• dattalab / moseq2-app
  MoSeq2 Jupyter Notebook platform used to run all of the MoSeq2 tools in a GUI.
  ☆32Updated 6 months ago
• ETHZ-INS / BehaviorFlow
  Code package that allows meta analyses of unsupervised behavior results
  ☆13Updated 2 months ago
• talialerner / Photometry-Analysis-Shared
  ☆11Updated 8 years ago
• bermanlabemory / motionmapperpy
  Modified Python 3.0 implementation of MotionMapper (https://github.com/gordonberman/MotionMapper)
  ☆27Updated 5 months ago
• VirtualBrainLab / Pinpoint
  Multi-probe trajectory planning in an intuitive 3D environment
  ☆49Updated last month
• PolarBean / DeepSlice
  A python package which aligns histology to the Allen Brain Atlas and Waxholm rat atlas using deep learning.
  ☆83Updated this week
• AdaptiveMotorControlLab / CellSeg3D
  A napari plugin for direct 3D cell segmentation -- taking you through training, inference, and review of masks
  ☆64Updated 2 weeks ago
• denisecailab / ezTrack
  Free, platform independent, behavior tracking software.
  ☆123Updated 4 months ago
• JingyiGF / HERBS
  ☆19Updated 9 months ago
• jessedmarshall / CAPTURE_demo
  Demo code for CAPTURE and DANNCE
  ☆27Updated 3 years ago
• petersaj / AP_histology
  Histology processing
  ☆64Updated 8 months ago
• zivlab / CellReg
  Registration of cells across sessions.
  ☆70Updated 3 months ago
• lahammond / BrainJ
  Fiji pipeline for automated serial section reconstruction and mouse brain analysis.
  ☆28Updated last year
• pyratlib / pyrat
  PyRat is a user friendly library in python to analyze data from the DeepLabCut. Developed to help researchers unfamiliar with programming…
  ☆46Updated 7 months ago
• amathislab / DLC2action
  DLC2Action is an action segmentation package that makes running and tracking of machine learning experiments easy.
  ☆24Updated 8 months ago
• denisecailab / minian
  miniscope analysis pipeline with interactive visualizations
  ☆91Updated 4 months ago