hadim / read-roiLinks
Read ROI files .zip or .roi generated with ImageJ.
☆53Updated 3 years ago
Alternatives and similar repositories for read-roi
Users that are interested in read-roi are comparing it to the libraries listed below
Sorting:
- Read and write ImageJ ROI format.☆84Updated last week
- Tools for distributed alignment of massive images☆92Updated this week
- Utils and convenience functions for large-scale bio-image analysis.☆60Updated last month
- Intensify3D is an image normalization tool for large scale fluorescent imaging. It corrects heterogeneities in the signal (defined by the…☆20Updated 4 years ago
- A napari plugin for making animations☆95Updated last week
- Create movies from series of key-frames in napari.☆38Updated 4 years ago
- A napari plugin for itk-elastix☆40Updated last month
- Scalable Neuroglancer compatible Downsampling, Meshing, Skeletonizing, Contrast Normalization, Transfers and more.☆65Updated 3 weeks ago
- Image Reading, Metadata Conversion, and Image Writing for Microscopy Images in Python☆221Updated 2 months ago
- ImgLib2/BDV implementation of Stitching for large datasets☆78Updated 3 months ago
- StarDist plugin for napari☆38Updated last year
- Python-based Human-In-the-LOop Workflow: PHILOW is an interactive deep learning-based platform for 3D datasets☆27Updated 11 months ago
- Python image segmentation plugin☆31Updated 5 years ago
- Interactive image stack viewing in jupyter notebooks based on ipycanvas and ipywidgets☆177Updated 3 weeks ago
- A library to facilitate machine learning on multi-dimensional images.☆87Updated last week
- Please go to https://github.com/CRBS/cdeep3m2 for most recent version☆59Updated 6 years ago
- ☆49Updated 2 months ago
- Python wrapper for cudaDecon - GPU accelerated 3D deconvolution for microscopy☆71Updated last week
- Read and write life sciences file formats☆142Updated 7 months ago
- Feature extraction for labeled objects in images using regionprops from scikit-image☆55Updated 9 months ago
- Specification for the bioimage.io model description file.☆22Updated this week
- Multiple file format reading directly into napari using pure Python☆39Updated 3 months ago
- Python Jupyter notebooks for BioImageAnalysis, GPU-accelerated image processing, bio-image data science and more☆153Updated 3 weeks ago
- A Python module for accessing Hamamatsu DCIMG files☆14Updated 2 years ago
- ClearMap 2 with WobblyStitcher, TubeMap and CellMap☆138Updated last month
- 3D Extension of the Cellpose Algorithm by Stringer et al., 2021.☆35Updated 3 years ago
- MultiModal Big Image Data Sharing and Exploration☆18Updated 3 years ago
- Cookiecutter for napari plugins☆71Updated last year
- A deep-learning library for denoising images using Noise2Void and friends (CARE, PN2V, HDN etc.), with a focus on user-experience and doc…☆119Updated this week
- Accelerated Pixel and Object Classifiers (APOC)☆59Updated 6 months ago