Read ROI files .zip or .roi generated with ImageJ.
☆53Jun 1, 2022Updated 4 years ago
Alternatives and similar repositories for read-roi
Users that are interested in read-roi are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Read and write ImageJ ROI format.☆89Feb 11, 2026Updated 5 months ago
- Matlab function to import ROIs from ImageJ☆27Dec 13, 2019Updated 6 years ago
- Calcium imaging inter-session alignment☆17Jun 8, 2026Updated last month
- Create movies from series of key-frames in napari.☆38May 24, 2021Updated 5 years ago
- python bindings to the ClearVolume project that enables serving numpy data from within python to the renderer.☆15Jan 24, 2017Updated 9 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- [DEPREACATED] Python interface for data-driven microscopy with Micro-manager/Micro-Magellan☆14May 13, 2020Updated 6 years ago
- GPU Deconvolution Library with C and Matlab API for nVidia GPUs☆21Mar 2, 2019Updated 7 years ago
- A JupyterBook site for napari workshop materials☆10Jul 11, 2022Updated 4 years ago
- Prototype implementation of napari-integrated CNN training viewer☆14Dec 27, 2024Updated last year
- 3-D imaging visualisation through slicing☆31Jan 14, 2025Updated last year
- High-throughput Detection of Neurons for Brain-wide analysis with Deep Learning☆18Feb 21, 2022Updated 4 years ago
- Search, download, and prepare brain atlas data.☆17Mar 10, 2023Updated 3 years ago
- Implementation of "Precise Mapping of Single Neurons by Calibrated 3D Reconstruction of Brain Slices Reveals Topographic Projection in Mo…☆16Oct 26, 2022Updated 3 years ago
- ImageJ Plugin for Flexible Atlas Segmentation Tool for Multi-Area Processing☆24Jul 4, 2022Updated 4 years ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- Python package for writing 5D numpy arrays to HDF5 files readable by both Imaris and BigDataViewer☆12Aug 13, 2021Updated 4 years ago
- ☆14Jan 25, 2024Updated 2 years ago
- Speed up coding/extending image analysis in Python.☆37May 9, 2026Updated 2 months ago
- Full Docs @ https://skalalab.github.io/flim_playground_doc/☆16Updated this week
- General-purpouse camera capture plugin for data streaming to napari☆26Mar 18, 2024Updated 2 years ago
- A fast and cross-platform image analysis framework for fluorescence time-lapse microscopy and bioimage informatics.☆45Jun 18, 2024Updated 2 years ago
- Kaibu -- a progressive web app for visualizing and annotating multi-dimensional images.☆35Apr 4, 2025Updated last year
- ☆13Jun 17, 2026Updated last month
- ClearVolume is a real-time live 3D visualization library designed for high-end volumetric microscopes such as SPIM and DLSM microscopes. …☆48Jun 11, 2026Updated last month
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- ☆13Apr 27, 2020Updated 6 years ago
- A python implementation of the Radiomics approach by Aerts et al (http://www.nature.com/articles/ncomms5006)☆10Mar 22, 2017Updated 9 years ago
- Dataset EXploration & Processing☆33May 11, 2023Updated 3 years ago
- Autonomous and accurate clustering of co-localized ion images in a self-supervised manner.☆12Dec 22, 2021Updated 4 years ago
- A portal for viewing FIB-SEM datasets☆13May 13, 2026Updated 2 months ago
- World's fastest DCE MRI analysis toolkit☆40Sep 7, 2021Updated 4 years ago
- A method of doing Continuous integration on a CI server when developing in MATLAB☆25Mar 21, 2016Updated 10 years ago
- A general illumination correction method for optical microscopy.☆45Aug 2, 2021Updated 4 years ago
- Notebooks to illustrate how BigFISH is working.☆12Sep 5, 2022Updated 3 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Python control of micro-manager for customized data acquisition☆185Jun 17, 2026Updated last month
- Tool for segmentation in bioimaging☆37Updated this week
- Fast and Accurate 3D PSF Computation for Fluorescence Microscopy☆50Apr 9, 2026Updated 3 months ago
- ☆20May 10, 2024Updated 2 years ago
- Package that facilitates pulling database entries from KEGG via its REST API☆14Jun 9, 2026Updated last month
- Process images using SimpleITK in napari☆23May 1, 2025Updated last year
- A plugin to read whole slide images within napari.☆21Nov 24, 2025Updated 8 months ago