hadim / read-roiLinks
Read ROI files .zip or .roi generated with ImageJ.
☆53Updated 3 years ago
Alternatives and similar repositories for read-roi
Users that are interested in read-roi are comparing it to the libraries listed below
Sorting:
- Read and write ImageJ ROI format.☆82Updated 6 months ago
- Tools for distributed alignment of massive images☆89Updated 2 months ago
- Utils and convenience functions for large-scale bio-image analysis.☆58Updated 3 months ago
- A napari plugin for making animations☆90Updated last month
- Scalable Neuroglancer compatible Downsampling, Meshing, Skeletonizing, Contrast Normalization, Transfers and more.☆57Updated 3 weeks ago
- Intensify3D is an image normalization tool for large scale fluorescent imaging. It corrects heterogeneities in the signal (defined by the…☆19Updated 4 years ago
- ImgLib2/BDV implementation of Stitching for large datasets☆77Updated 2 weeks ago
- Interactive image stack viewing in jupyter notebooks based on ipycanvas and ipywidgets☆171Updated 6 months ago
- Create movies from series of key-frames in napari.☆38Updated 4 years ago
- Python-based Human-In-the-LOop Workflow: PHILOW is an interactive deep learning-based platform for 3D datasets☆27Updated 9 months ago
- Image Reading, Metadata Conversion, and Image Writing for Microscopy Images in Python☆220Updated 10 months ago
- Read and write life sciences file formats☆142Updated 5 months ago
- ☆49Updated this week
- Python wrapper for cudaDecon - GPU accelerated 3D deconvolution for microscopy☆70Updated 2 weeks ago
- Specification for the bioimage.io model description file.☆21Updated this week
- ClearMap 2 with WobblyStitcher, TubeMap and CellMap☆130Updated 3 weeks ago
- Open-source, GPU accelerated code for deskewing and deconvolving lattice light sheet data☆27Updated 5 years ago
- GPU-accelerated general purpose image processing and image analysis in napari☆35Updated 6 months ago
- A deep-learning library for denoising images using Noise2Void and friends (CARE, PN2V, HDN etc.), with a focus on user-experience and doc…☆107Updated this week
- Home of the ImageJ BAR: A collection of Broadly Applicable Routines for ImageJ☆26Updated 3 years ago
- A napari plugin for itk-elastix☆39Updated this week
- Multiple file format reading directly into napari using pure Python☆39Updated last month
- Cookiecutter for napari plugins☆72Updated last year
- Creating figures and animations for multi-channel images with a focus on microscopy.☆78Updated 11 months ago
- A Python software library with a variety of functions for (optical) microscopy image restoration, reconstruction and analysis.☆83Updated 2 months ago
- Automated mitochondrial segmentation and tracking.☆33Updated 4 years ago
- A library to facilitate machine learning on multi-dimensional images.☆86Updated this week
- Finite-Element Assisted Brain Assembly System for stitching & alignment of connectomics data☆19Updated this week
- Browse your OMERO database from within napari.☆39Updated 2 weeks ago
- StarDist plugin for napari☆39Updated last year