small scripts, functions or bits of code for parsing genomic data
☆14Sep 24, 2022Updated 3 years ago
Alternatives and similar repositories for generic_genomics
Users that are interested in generic_genomics are comparing it to the libraries listed below
Sorting:
- Pipelines for Drosophila genome assembly and analysis☆16May 15, 2022Updated 3 years ago
- collection of bioinformatic scripts☆32May 3, 2024Updated last year
- Various scripts that I have created that are useful for genome annotation (repeats & proteins)☆16Feb 21, 2022Updated 4 years ago
- Scripts for Hill et al. (2022) doi:10.1093/molbev/msac085 🟣☆11Apr 28, 2023Updated 2 years ago
- Bioinformatics scripts for genome analysis☆17Oct 26, 2022Updated 3 years ago
- Custom scripts for monotreme genome project☆19Jan 12, 2021Updated 5 years ago
- Python Scripts for Bioinformatics☆15Apr 24, 2024Updated last year
- ☆10Feb 25, 2024Updated 2 years ago
- The fastest VCF/BCF parser in R https://doi.org/10.1093/bioinformatics/btae049☆19Jan 9, 2026Updated 2 months ago
- Utilities to detect and profile `het-kmers`☆12Aug 5, 2024Updated last year
- Repository☆10Oct 23, 2024Updated last year
- This is something I have decided to do to make something good come out of the current covid situation. Here I will put the publicly avail…☆12Sep 6, 2021Updated 4 years ago
- ☆13Dec 4, 2025Updated 3 months ago
- An RNA-Seq data exploration tool that shows read map coverage of a gene of interest along with a coloured "electronic fluorescent pictog…☆13Feb 26, 2026Updated 3 weeks ago
- Gene Prediction using MAKER, CEGMA, SNAP, GENEMARK & AUGUSTUS☆10Jul 20, 2017Updated 8 years ago
- My R scripts, primarily R plotting scripts + some genomics software including 16S rRNA metataxnomics and RNAseq☆12Dec 19, 2022Updated 3 years ago
- PhenomeXcan: mapping the genome to the phenome through the transcriptome☆11Jun 28, 2020Updated 5 years ago
- cgat-apps repository☆35Apr 9, 2025Updated 11 months ago
- Westlake BioBank for Chinese pilot project☆10May 17, 2023Updated 2 years ago
- ☆10May 17, 2022Updated 3 years ago
- GenomeTools: Scripts and Classes for Working with Genomic Data☆12Jun 7, 2018Updated 7 years ago
- Code used to process and analyze structural variants and short tandem repeat variants profiled in 719 deeply sequenced whole genomes as p…☆11Jun 25, 2019Updated 6 years ago
- ☆24Nov 9, 2017Updated 8 years ago
- ☆10Jan 30, 2020Updated 6 years ago
- Fine mapping of genes associated with Parkinson's Disease using a variety of methods☆11Mar 7, 2022Updated 4 years ago
- association analysis of distance matrices using gradient forest approach☆16Oct 7, 2025Updated 5 months ago
- Contributions to the #30daychartchallenge☆10Apr 10, 2025Updated 11 months ago
- ☆12Jun 12, 2023Updated 2 years ago
- Direct RNA publication scripts☆11Sep 20, 2017Updated 8 years ago
- Plot allele frequencies in VCF files☆11Jun 4, 2019Updated 6 years ago
- A collection of python and bash scripts for various bioinformatics-related tasks☆12Sep 19, 2024Updated last year
- Standard operating procedures for H3ABionet data processing and analyses☆11Aug 30, 2021Updated 4 years ago
- Analysis of snRNA-seq2 data coming from 3 months old mouse liver, dissecting the influence ploidy has on gene expression.☆14Dec 6, 2021Updated 4 years ago
- Cool Bioinformatics Scripts☆12May 21, 2024Updated last year
- A GWAS course☆12Nov 4, 2021Updated 4 years ago
- Simple yet tasteful CV and cover letter LaTeX templates☆22Nov 18, 2020Updated 5 years ago
- An efficient genetic data imputation pipeline☆12Apr 7, 2022Updated 3 years ago
- Data Visualizations for the #30DayChartChallenge☆11Apr 15, 2024Updated last year
- ☆10Apr 13, 2022Updated 3 years ago