On-demand containers provisioning service
☆51Mar 18, 2026Updated this week
Alternatives and similar repositories for wave
Users that are interested in wave are comparing it to the libraries listed below
Sorting:
- A framework to build Software As A Service (SaaS) platforms for Nextflow pipelines.☆17Sep 6, 2025Updated 6 months ago
- Nextflow workflows to assign Salmonella serotype based on Genome similarity using MASH, SOURMASH and KMA.☆13Dec 24, 2025Updated 2 months ago
- nf-test utility functions☆12Mar 5, 2026Updated 2 weeks ago
- Simple test framework for Nextflow pipelines☆178Updated this week
- A nextflow pipeline for calling exome CNVs☆13Feb 24, 2026Updated 3 weeks ago
- Command line tool for Wave containers provisioning service☆19Mar 11, 2026Updated last week
- Nextflow Tower CLI tool☆53Mar 12, 2026Updated last week
- Build contrasts for models defined with formulaic☆12Updated this week
- Nextflow runs monitoring and organisation UI☆77Sep 20, 2024Updated last year
- Read fcs files.☆12Nov 13, 2025Updated 4 months ago
- Functionality for working with pipeline and sample sheet schema files in Nextflow pipelines☆52Feb 5, 2026Updated last month
- Customer workshop materials☆19May 11, 2023Updated 2 years ago
- ☆23Feb 12, 2026Updated last month
- Kraken2 Server☆23Nov 24, 2025Updated 3 months ago
- A Nextflow pipeline for viral genomics (Influenza/RSV) supporting Illumina and Nanopore sequencing of clinical and wastewater samples.☆10Feb 27, 2026Updated 3 weeks ago
- A Nextflow pipeline to play Doom☆10Dec 1, 2025Updated 3 months ago
- Access public biological ontologies.☆15Aug 7, 2024Updated last year
- Experimental features for Nextflow☆48Dec 30, 2025Updated 2 months ago
- Rapid identification of Staphylococcus aureus agr locus type and agr operon variants.☆10Jan 6, 2023Updated 3 years ago
- ☆30Updated this week
- Params validation plugin for Nextflow pipelines☆48Aug 7, 2024Updated last year
- Python implementation and field-tool for automated pipeline launching through Tower CLI (beta)☆33Dec 1, 2025Updated 3 months ago
- This repository hosts a large collection of Nextflow snippets☆56Jan 26, 2025Updated last year
- NCBI Pathogen Detection Portal toolkit☆11Sep 6, 2023Updated 2 years ago
- Nextflow training material☆231Updated this week
- Generate basic stats for an assembly.☆13Feb 12, 2023Updated 3 years ago
- drunk on perbase pileups and lua expressions☆19Nov 15, 2025Updated 4 months ago
- Ampseer examines reads in fastq format and identifies which multiplex PCR primer set was used to generate the SARS-CoV-2 sequencing libra…☆15Feb 27, 2024Updated 2 years ago
- Examples showing how to configure Nextflow to run with Wave containers provisioning service☆21Nov 2, 2024Updated last year
- ☆10Apr 16, 2025Updated 11 months ago
- Static website for the PH4AGE alliance☆13Oct 27, 2023Updated 2 years ago
- Study management software for research organizations.☆27Jan 22, 2026Updated 2 months ago
- This pipeline has moved! Please see:☆11Mar 12, 2018Updated 8 years ago
- Web application to collect and visualise data across multiple MultiQC runs.☆95Dec 13, 2024Updated last year
- Archived - please see updated sccmec tool at link below☆13Aug 30, 2024Updated last year
- Repository to host tool-specific module files for the Nextflow DSL2 community!☆404Updated this week
- Cookiecutter profile for making a NextFlow-based bioinformatics tool☆17Jul 8, 2024Updated last year
- ☆13Jun 21, 2017Updated 8 years ago
- A novel management, annotation, and machine learning framework for analyzing cancer mutations☆31Jul 4, 2024Updated last year