GeneMiner2 is an enhanced version of our previous developments Easy353 and GeneMiner
☆19Aug 28, 2026Updated 3 weeks ago
Alternatives and similar repositories for GeneMiner2
Users that are interested in GeneMiner2 are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Easy353 is a tool for recovering Angiosperms353 gene set.☆12Jul 29, 2025Updated last year
- ☆25Oct 16, 2024Updated last year
- common bioinformatic scripts☆17Apr 28, 2021Updated 5 years ago
- GeneMiner: a tool for extracting phylogenetic markers from next-generation sequencing data☆11Feb 22, 2024Updated 2 years ago
- snpick is a fast and memory-efficient Rust-based SNP extraction tool designed to handle large genomic alignments with minimal RAM usage a…☆17Sep 2, 2026Updated 2 weeks ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- Plastid Genome Annotator☆58Oct 29, 2020Updated 5 years ago
- Reduce genome assembly redundancy using shared mapped k-mer method.☆15Apr 28, 2025Updated last year
- Graph-based Sequence Assembly Toolkit☆24Sep 11, 2026Updated last week
- Reconstruct Ancestral State in Phylogenies☆32May 21, 2024Updated 2 years ago
- ☆33Mar 3, 2026Updated 6 months ago
- Add multiple thread function for genome comparison☆17Sep 29, 2021Updated 4 years ago
- Mosaic Genome Assembler☆29Updated this week
- reference-free estimation of ploidy level from whole genome sequencing data based on de Bruijn graph☆22Jul 26, 2023Updated 3 years ago
- Niche Region and Niche Overlap Metrics for Multidimensional Ecological Niches☆10Oct 13, 2023Updated 2 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- ☆23Jan 6, 2026Updated 8 months ago
- We developed GenomeSyn as a new tool for constructing and visualizing genome synteny, its novel design and implementation can serve as a …☆36Jan 3, 2022Updated 4 years ago
- R package for ecological niche analysis (subniche on CRAN). Refines OMI analysis for realized niche decomposition using marine and enviro…☆11Apr 1, 2026Updated 5 months ago
- The tools are used for displaying hic signal of genome☆25Jan 4, 2021Updated 5 years ago
- ☆22Dec 9, 2023Updated 2 years ago
- Structure Harvester is a program for parsing the output of Pritchard's STRUCTURE and for performing the Evanno method.☆35Jul 9, 2022Updated 4 years ago
- ☆159Aug 11, 2026Updated last month
- Centromics: visualing centromeres with multiple omics data☆21Jan 18, 2024Updated 2 years ago
- Tools for ecological niche evolution assessment considering uncertainty☆15Mar 10, 2023Updated 3 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Chromosome-level synteny plotting using orthologous regions☆33Sep 19, 2024Updated 2 years ago
- Software GMATA for SSR mining, marker designing, genotyping, plot etc.☆18Oct 6, 2025Updated 11 months ago
- Assign taxonomy with blast, can be used for qiime☆26Mar 25, 2025Updated last year
- Detects and blacklists paralog RAD loci analyzed in Stacks or ipyrad, based on the McKinney 2017 method (doi:10.1111/1755-0998.12613)☆10Sep 4, 2019Updated 7 years ago
- ☆16Jul 25, 2021Updated 5 years ago
- A high-performance in-silico PCR tool for primer matching and product extraction from FASTA and GenBank sequences.☆19Feb 25, 2026Updated 6 months ago
- 16S rRNA database☆13Nov 29, 2018Updated 7 years ago
- R package☆13Dec 9, 2025Updated 9 months ago
- script that convert vcf file into genotype data matrix to input DIYABC program.☆12Jul 9, 2015Updated 11 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- ☆11Sep 16, 2021Updated 5 years ago
- ☆10Sep 9, 2026Updated last week
- ☆16Apr 14, 2021Updated 5 years ago
- IRI parsing and IRI-URI conversion utilities, aimed at Node.js☆15Aug 31, 2022Updated 4 years ago
- Organelle Genome Assembly Toolkit (Chloroplast/Mitocondrial/ITS)☆398Feb 13, 2025Updated last year
- ☆11Aug 18, 2026Updated last month
- Rapid alignment-free method for introgression screening and GWAS using k-mer profiles☆32Apr 22, 2026Updated 4 months ago