sarisabban / VaxDesign
A script that computationally designs a vaccine
☆17Updated 2 years ago
Related projects ⓘ
Alternatives and complementary repositories for VaxDesign
- ☆20Updated last year
- Evolutionary conservation estimation of residues or nucleotides☆33Updated 2 years ago
- ☆32Updated 3 weeks ago
- scripts and facilities for in-silico mutagenesis with FoldX☆50Updated this week
- Visually explore covariation in protein families☆37Updated 4 years ago
- Prediction of B-cell epitopes from amino acid sequences using deep neural networks.☆14Updated 3 years ago
- AlphaFill is an algorithm based on sequence and structure similarity that “transplants” missing compounds to the AlphaFold models. By add…☆90Updated 6 months ago
- ATTRACT program suite for macromolecular docking (protein-protein, protein-nucleic acid, protein-peptide)☆16Updated 9 months ago
- Rapid protein-protein interaction network creation from multiple sequence alignments with Deep Learning☆77Updated 7 months ago
- A unified and modular interface to homology modelling software☆11Updated last year
- A domain parser for Alphafold models☆32Updated 11 months ago
- ☆15Updated last year
- ☆20Updated 5 months ago
- A tool for accurate prediction of a protein's secondary structure from only it's amino acid sequence☆48Updated 3 months ago
- ☆27Updated 6 months ago
- predict stability change upon mutation☆27Updated 4 months ago
- Predicting the effect of mutations on protein stability and protein binding affinity using pretrained neural networks and a ranking objec…☆19Updated 3 years ago
- a collection of colabs useful for molecular biology☆27Updated 8 months ago
- Tools for annotation, processing and ML for antibody sequences☆20Updated this week
- ☆32Updated this week
- A bash script for an automated Rosetta Abinitio folding simulation on an HPC☆11Updated 4 years ago
- ☆78Updated 9 months ago
- PCA and normal mode analysis of proteins☆15Updated 5 months ago
- Interactive Python notebooks for PDBe API training☆45Updated last week
- Python package for analysis of antibody heavy and light chains☆23Updated 4 years ago
- ColabFold protocol☆42Updated 3 weeks ago
- Deep learning prediction of enzyme optimum pH☆22Updated 11 months ago
- Python package to manage protein structures and their annotations☆40Updated 8 months ago
- ☆21Updated last year
- Robust RNA structure refinement by a nucleobase-centric sampling algorithm coupled with a backbone rotameric and quantum-mechanical-energ…☆15Updated 3 years ago