A script that computationally designs a vaccine
☆18Jan 9, 2022Updated 4 years ago
Alternatives and similar repositories for VaxDesign
Users that are interested in VaxDesign are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- RosettaDesign using PyRosetta☆33Aug 22, 2019Updated 6 years ago
- R Shiny application "Vaccine Designer" aiming for the construction of vaccine sequences based on multi epitope design workflow.☆11Jun 25, 2024Updated 2 years ago
- Protein-protein binding affinity benchmark☆18Feb 14, 2025Updated last year
- A bash script for an automated Rosetta Abinitio folding simulation on an HPC☆11Aug 29, 2020Updated 5 years ago
- ☆22Jun 10, 2024Updated 2 years ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- Python Toolbox For Rosetta Silent Files Processing☆10Aug 2, 2021Updated 5 years ago
- ☆23Dec 4, 2025Updated 8 months ago
- Detect, analyze, and visualize protein symmetry☆32Dec 19, 2025Updated 7 months ago
- implementing PDB to FASTA file format conversion in multiple languages☆20Sep 27, 2017Updated 8 years ago
- Preforms De novo protein design using machine learning and PyRosetta to generate a novel protein structure☆52Mar 7, 2025Updated last year
- Binding Affinity Prediction using Deep learning models☆12Jun 9, 2021Updated 5 years ago
- Rosetta FunFolDes – a general framework for the computational design of functional proteins.☆20Apr 12, 2019Updated 7 years ago
- The present study is finalised to determine the most advanced models in the literature capable of producing new high-quality molecules st…☆10Aug 31, 2021Updated 4 years ago
- Ligand-binding site classification with deep graph neural networks.☆10Sep 24, 2023Updated 2 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- A toolkit for predicting the binding mode of small molecules interacting with proteins based on interfacial rigidification, as assessed b…☆10Nov 22, 2016Updated 9 years ago
- ☆15Nov 11, 2023Updated 2 years ago
- ProteinFeatureAnalyzer extracts, analyzes and visualizes features from protein structures.☆14Mar 14, 2020Updated 6 years ago
- Python interface for the RCSB search API.☆20Mar 20, 2024Updated 2 years ago
- Fine mapping of genes associated with Parkinson's Disease using a variety of methods☆11Mar 7, 2022Updated 4 years ago
- Deep convolutional neural networks for protein contact map prediction☆23Aug 5, 2019Updated 7 years ago
- Python Scripts for Bioinformatics☆15Apr 24, 2024Updated 2 years ago
- De novo design of small molecule binding sites into proteins☆11Apr 14, 2021Updated 5 years ago
- using shallow neural network layer (embedding) to infer gene-gene/sample relationship from gene expression data☆21Nov 16, 2018Updated 7 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Python utilities for handling Rosetta output and PDB files☆16Sep 26, 2011Updated 14 years ago
- Repository for the code associated with the paper Impact of applicability domains by Maxime Langevin et al.☆13Feb 19, 2025Updated last year
- Multi-nucleotide Variation Annotation Corrector☆11Dec 13, 2022Updated 3 years ago
- ☆12May 16, 2020Updated 6 years ago
- Browser-based tool for visualizing and analyzing germline copy number variants in genomic data☆12Nov 7, 2024Updated last year
- mGPfusion is a Gaussian process based method for predicting stability changes upon single and multiple mutations of proteins that comple…☆15May 24, 2018Updated 8 years ago
- software used in paper "Antibody interface prediction with 3D Zernike descriptors and SVM"☆13Mar 28, 2021Updated 5 years ago
- ☆16Jun 22, 2020Updated 6 years ago
- Protein common interface databases☆10Apr 13, 2019Updated 7 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- to assess structural quality of RNA using 3D CNN☆15Aug 17, 2018Updated 7 years ago
- This repository contains the source code of the revised version of MutPanning. MutPanning is publicly available under the BSD3-Clause ope…☆14Nov 12, 2019Updated 6 years ago
- ☆21Mar 20, 2025Updated last year
- What exactly are the non-canonical amino acids in the Rosetta database folder?☆12Feb 16, 2020Updated 6 years ago
- ☆17Nov 11, 2022Updated 3 years ago
- SpatialPPIv2: Enhancing protein–protein interaction prediction through graph neural networks with protein language models.☆28Jan 8, 2026Updated 7 months ago
- Python package to manage protein structures and their annotations☆46Mar 18, 2026Updated 4 months ago