Alternatives and similar repositories for prot_domain_segmentor

Users that are interested in prot_domain_segmentor are comparing it to the libraries listed below

• Shen-Lab / gcWGAN
  Guided Conditional Wasserstein GAN for De Novo Protein Design
  ☆37Updated 4 years ago
• sdaberdaku / AntibodyInterfacePrediction
  software used in paper "Antibody interface prediction with 3D Zernike descriptors and SVM"
  ☆13Updated 4 years ago
• ihmwg / python-modelcif
  Python package for handling ModelCIF mmCIF and BinaryCIF files
  ☆13Updated this week
• nanand2 / protein_seq_des
  Code for our paper "Protein sequence design with a learned potential"
  ☆34Updated 4 years ago
• PDBeurope / protein-cluster-conformers
  Clusters protein chains based on CA distance difference
  ☆16Updated 7 months ago
• sokrypton / tf_proteins
  some tools for working with protein (PDB) files in tensorflow
  ☆11Updated 6 years ago
• dohlee / antiberty-pytorch
  An unofficial re-implementation of AntiBERTy, an antibody-specific protein language model, in PyTorch.
  ☆25Updated last year
• csi-greifflab / manuscript_insilico_antibody_generation
  ☆23Updated 4 years ago
• leeyang / ResPRE
  ResPRE is an algorithm for protein residue-residue contact-map prediction
  ☆21Updated 6 years ago
• dtischer / trdesign-motif
  Codebase for our preprint using trRosetta to design proteins with discontinuous functional sites, found here: https://www.biorxiv.org/con…
  ☆16Updated 3 years ago
• FTD007 / PInet
  ☆25Updated 3 years ago
• ElwynWang / DeepFragLib
  ☆29Updated 5 years ago
• i-Molecule / bitenet
  Spatiotemporal identification of druggable binding sites using deep learning
  ☆22Updated 4 years ago
• baldassarreFe / graphqa
  Protein quality assessment using Graph Convolutional Networks
  ☆29Updated 2 years ago
• ranganathanlab / bmDCA
  Fork of matteofigliuzzi/bmDCA repository for Boltzmann-machine Direct Coupling Analysis (bmDCA).
  ☆35Updated 5 years ago
• LPDI-EPFL / FunFolDesData
  Rosetta FunFolDes – a general framework for the computational design of functional proteins.
  ☆21Updated 6 years ago
• jaaamessszzz / BindingSitesFromFragments
  De novo design of small molecule binding sites into proteins
  ☆12Updated 4 years ago
• LSSI-ETH / meta-learning-for-protein-engineering
  Meta learning addresses noisy and under-labeled data in machine learning-guided antibody engineering (https://doi.org/10.1016/j.cels.2023…
  ☆20Updated last year
• Shen-Lab / BAL
  Bayesian Active Learning for Optimization and Uncertainty Quantification with Applications to Protein Docking
  ☆13Updated 4 years ago
• Graylab / deepH3-distances-orientations
  ☆35Updated 3 years ago
• Kuhlman-Lab / PIPPack
  Implementation of Protein Invariant Point Packer (PIPPack)
  ☆35Updated last year
• ProteinDesignLab / protein_seq_des
  Code for our paper "Protein sequence design with a learned potential"
  ☆79Updated 2 years ago
• agrybauskas / rotag
  A collection of tools that generate and analyse side-chain rotamer libraries
  ☆10Updated last week
• TobiasHeOl / AbLang2
  An antibody-specific language model focusing on NGL prediction
  ☆21Updated 6 months ago
• stemylonas / DeepSurf
  A surface-based deep learning approach for the prediction of ligand binding sites on proteins
  ☆44Updated 2 years ago
• eliberis / parapred
  Paratope Prediction using Deep Learning
  ☆61Updated 2 years ago
• ostrokach / proteinsolver
  Graph neural network for generating novel amino acid sequences that fold into proteins with predetermined topologies.
  ☆60Updated 4 years ago
• ak422 / DDAffinity
  ☆22Updated 3 months ago
• aaronkollasch / seqdesign-pytorch
  Protein design and variant prediction using autoregressive generative models
  ☆24Updated 2 years ago
• sokrypton / roscon2024
  Tutorial files
  ☆11Updated last year