implementing PDB to FASTA file format conversion in multiple languages
☆20Sep 27, 2017Updated 8 years ago
Alternatives and similar repositories for pdb2fasta
Users that are interested in pdb2fasta are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- awesome tools for RNA☆17Nov 15, 2022Updated 3 years ago
- A script that computationally designs a vaccine☆18Jan 9, 2022Updated 4 years ago
- A fork for the old hhsuite-2.0.16☆13Nov 27, 2020Updated 5 years ago
- ATTRACT program suite for macromolecular docking (protein-protein, protein-nucleic acid, protein-peptide)☆20Mar 13, 2026Updated 3 months ago
- parKVFinder-win: thread-level parallel KVFinder for Windows☆10Sep 12, 2024Updated last year
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- A structure checker in python☆25Nov 25, 2024Updated last year
- A collection of tools that generate and analyse side-chain rotamer libraries☆10Updated this week
- Search text files for DNA sequences and their reverse complements☆13Mar 2, 2017Updated 9 years ago
- Basic RNA 3D structure comparison metrics in RNA-Puzzles, including INF, DI and RMSD. It also includes `RNA_normalizer` tool in pdb_utils…☆27Dec 3, 2024Updated last year
- OPUS-Rota4: A Gradient-Based Protein Side-Chain Modeling Framework Assisted by Deep Learning-Based Predictors☆11Apr 14, 2022Updated 4 years ago
- An R package for the processing of plate reader and flow cytometry data. This includes: normalisation and calibration of plate reader dat…☆10Apr 22, 2026Updated last month
- parKVFinder: thread-level parallel KVFinder☆16May 9, 2025Updated last year
- Machine learning utility functions and classes.☆12Jan 14, 2023Updated 3 years ago
- The bioplib library☆12Jul 25, 2023Updated 2 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Predict protein local properties using sequence or profile information.☆23Nov 16, 2020Updated 5 years ago
- An automated model test system for synthetic biology models of gene expression and regulation.☆15Sep 17, 2020Updated 5 years ago
- Contact-based protein structure prediction☆10Feb 12, 2019Updated 7 years ago
- General low-level API☆50Jul 18, 2022Updated 3 years ago
- ☆14Jan 5, 2026Updated 5 months ago
- This software package simulates the reduction of graphene oxide and calculates the optical response of the generated sp2 domains☆11Dec 22, 2016Updated 9 years ago
- test☆14Nov 13, 2020Updated 5 years ago
- ☆12Jan 27, 2025Updated last year
- Script to facilitate the making of horizontal scripts☆18May 25, 2024Updated 2 years ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- This program computes the sum-frequency generation (SFG) spectrum for a give MD trajectory of interfacial water molecules. The program ca…☆13Jul 24, 2023Updated 2 years ago
- RNA Structural Bioinformatics Crash Course & Data Science in Python☆14Oct 19, 2022Updated 3 years ago
- RNAView identifies base pairs that are formed in nucleic acid structures and classifies them according to the system of Leontis and Westh…☆20Jul 11, 2024Updated last year
- Tool to compute bond and angle force field parameters with the Seminario method☆14Apr 15, 2018Updated 8 years ago
- various sources and scripts for genomic research software☆10May 11, 2015Updated 11 years ago
- ☆13Nov 12, 2021Updated 4 years ago
- Interface for Non-Adiabatic Quantum mechanics/molecular mechanics in Solvent☆10Feb 10, 2026Updated 4 months ago
- ☆11Aug 30, 2020Updated 5 years ago
- Tools, tutorials, and wiki for GROMACS☆21Jul 21, 2020Updated 5 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- A tool to draw Graphene Oxide 3D chemical structures. (Python 2.7)☆11Nov 27, 2017Updated 8 years ago
- GridMAT-MD membrane analysis program☆26Sep 15, 2018Updated 7 years ago
- Convenience functions for VMD-TCL scripting☆14Apr 3, 2026Updated 2 months ago
- atomes: codeblocks dev files☆15Updated this week
- Toolkit for Modelling and Simulation of Gene Expressions and Metabolism☆13Apr 1, 2026Updated 2 months ago
- ☆12May 12, 2023Updated 3 years ago
- Simple small molecular docking and conformation filtering tool.☆13Updated this week