Detect, analyze, and visualize protein symmetry
☆30Dec 19, 2025Updated 4 months ago
Alternatives and similar repositories for symmetry
Users that are interested in symmetry are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Methods for mapping proteomics data on 3D protein structure.☆15Jan 18, 2020Updated 6 years ago
- A bash script for an automated Rosetta Abinitio folding simulation on an HPC☆11Aug 29, 2020Updated 5 years ago
- Methods for mapping genomic data onto 3D protein structure.☆28May 17, 2022Updated 3 years ago
- mirror of https://zhanglab.ccmb.med.umich.edu/EDTSurf/☆10Jun 20, 2023Updated 2 years ago
- The Visualization of Protein-Ligand Graphs software that powers the PTGL☆16Apr 4, 2024Updated 2 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Rosetta FunFolDes – a general framework for the computational design of functional proteins.☆21Apr 12, 2019Updated 7 years ago
- Preforms De novo protein design using machine learning and PyRosetta to generate a novel protein structure☆52Mar 7, 2025Updated last year
- A script that computationally designs a vaccine☆18Jan 9, 2022Updated 4 years ago
- Protein-Protein Docking using Genetic Algorithm☆20Updated this week
- A package for making tree-based visualizations for embedding vectors☆10Feb 6, 2023Updated 3 years ago
- DISTEVAL: A web-server for evaluating protein inter-residue distances☆18Mar 7, 2022Updated 4 years ago
- ☆40Mar 25, 2026Updated 3 weeks ago
- Protein Structure Archiver☆14Sep 10, 2025Updated 7 months ago
- Plugin to UCSF Chimera for segmenting Cryo-EM density maps☆11Dec 18, 2024Updated last year
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Biomolecular Illustration Tool☆124Aug 17, 2024Updated last year
- DomainMapper is a parser for hmmscan full output files built centrally around ECOD domain definitions. Users can optimize DomainMapper's …☆13Dec 13, 2023Updated 2 years ago
- Explore protein fold space with deep generative models☆16Aug 5, 2024Updated last year
- Protein structure descriptors and alignment based on 3D Zernike moments.☆39Apr 10, 2026Updated last week
- Structural Bioinformatics Training Workshop & Hackathon 2017☆19Jan 23, 2018Updated 8 years ago
- Deep ResNet-based protein contact prediction☆19Mar 30, 2020Updated 6 years ago
- HTMD: Programming Environment for Molecular Discovery☆274Updated this week
- ProQDock is a Protein-Protein docking scoring program that uses high level coordinate driven features compiled and trained by a Support V…☆11Dec 11, 2021Updated 4 years ago
- A tool for accurate prediction of a protein's secondary structure from only it's amino acid sequence☆67Apr 2, 2025Updated last year
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- RosettaDesign using PyRosetta☆33Aug 22, 2019Updated 6 years ago
- A package to predict protein inter-residue geometries from sequence data☆222Sep 27, 2021Updated 4 years ago
- Automated construction of protein chimeras and their analysis.☆14Sep 29, 2023Updated 2 years ago
- The Expanded Package for IET Solvation☆13Feb 6, 2025Updated last year
- DSSPparser is an easy tool to parse dssp file, and can transform PDB format file to dssp format file by xssp,also support the tansfrom be…☆13Sep 20, 2022Updated 3 years ago
- A toolkit for predicting the binding mode of small molecules interacting with proteins based on interfacial rigidification, as assessed b…☆10Nov 22, 2016Updated 9 years ago
- Disordered protein ensemble prediction☆14Apr 2, 2026Updated 2 weeks ago
- Improved protein complex prediction with AlphaFold-multimer by denoising the MSA profile☆72Aug 26, 2024Updated last year
- Javascript package for embedding sequence logos☆19Jun 16, 2025Updated 10 months ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- C-library for calculating Solvent Accessible Surface Areas☆183Nov 15, 2025Updated 5 months ago
- Tutorial files☆12Aug 7, 2024Updated last year
- Python interface for the RCSB search API.☆20Mar 20, 2024Updated 2 years ago
- EvoEF + evolutionary profile for ddG_bind prediction☆14Oct 17, 2025Updated 6 months ago
- protein docking stuff☆52Apr 2, 2026Updated 2 weeks ago
- Fraction of Common Contacts Clustering Algorithm for Protein Structures☆27Aug 12, 2021Updated 4 years ago
- ☆15Mar 25, 2016Updated 10 years ago