sbliven / rcsbsearchLinks
Python interface for the RCSB search API.
☆20Updated last year
Alternatives and similar repositories for rcsbsearch
Users that are interested in rcsbsearch are comparing it to the libraries listed below
Sorting:
- some tools for working with protein (PDB) files in tensorflow☆11Updated 6 years ago
- Python tool for the discovery of similar 3D structural motifs across protein structures.☆34Updated last year
- ☆30Updated 5 months ago
- Python package for handling ModelCIF mmCIF and BinaryCIF files☆13Updated last week
- Clusters protein chains based on CA distance difference☆16Updated 8 months ago
- Python package to manage protein structures and their annotations☆44Updated last year
- Automatic Retrieval and ClusTering of Interfaces in Complexes from 3D structural information☆32Updated 3 weeks ago
- DiffDock implementation that adds support for HPC execution using Slurm and Singularity☆26Updated 5 months ago
- Real-time structure motif searching in protein 3D structures using an inverted index strategy☆14Updated 3 months ago
- An open-source library for the analysis of protein interactions.☆32Updated 3 years ago
- MD DaVis: A python package to analyze molecular dynamics trajectories of proteins☆16Updated 8 months ago
- Ligand binding site prediction and virtual screening☆12Updated 7 years ago
- pyPept: a python library to generate atomistic 2D and 3D representations of peptides☆79Updated last week
- Fraction of Common Contacts Clustering Algorithm for Protein Structures☆27Updated 4 years ago
- 2D portraits of 3D protein structures☆26Updated last month
- Structural space exploration of AlphaFold DB☆12Updated 4 years ago
- The DSSP building software☆47Updated 2 years ago
- This is the public repository for the RING PyMOL plugin developed by the BioComputing UP laboratory at the University of Padua☆29Updated last month
- NodeCoder is a general framework based on graph convolutional neural network for protein function prediction.☆33Updated last year
- MEGADOCK on Google Colaboratory☆18Updated 2 years ago
- Parametric Building of de novo Functional Topologies☆44Updated 3 years ago
- Tutorial files☆12Updated last year
- Some scripts that I keep using over and over.☆20Updated 3 months ago
- ☆27Updated 4 years ago
- De novo design of small molecule binding sites into proteins☆12Updated 4 years ago
- ☆51Updated 10 months ago
- Voronota is a software tool for analyzing three-dimensional structures of biological macromolecules using the Voronoi diagram of atomic b…☆38Updated this week
- Contact map analysis for biomolecules; based on MDTraj☆46Updated 10 months ago
- ☆36Updated last year
- Explicit crosslinks in AlphaFold 3☆23Updated 7 months ago