sarisabban / RosettaAbinitio
A bash script for an automated Rosetta Abinitio folding simulation on an HPC
☆11Updated 4 years ago
Related projects: ⓘ
- MEGADOCK on Google Colaboratory☆14Updated 11 months ago
- PyDock Tutorial☆30Updated 6 years ago
- RosettaDesign using PyRosetta☆27Updated 5 years ago
- Some scripts that I keep using over and over.☆17Updated 6 months ago
- ☆20Updated last year
- Automated construction of protein chimeras and their analysis.☆14Updated 11 months ago
- Predicting the effect of mutations on protein stability and protein binding affinity using pretrained neural networks and a ranking objec…☆18Updated 3 years ago
- Material to run the HADDOCK antibody-antigen modelling protocol☆19Updated 8 months ago
- Robust RNA structure refinement by a nucleobase-centric sampling algorithm coupled with a backbone rotameric and quantum-mechanical-energ…☆14Updated 3 years ago
- Generates consistent PSSM and/or PDB files for protein-protein complexes☆17Updated 2 years ago
- A domain parser for Alphafold models☆29Updated 9 months ago
- ☆19Updated 2 years ago
- An accurate and efficient protein sequence design approach☆19Updated 9 months ago
- A Memetic Algorithm boosts accuracy and speed of all-atom protein-protein docking☆23Updated 5 months ago
- Python package to manage protein structures and their annotations☆40Updated 6 months ago
- ☆30Updated 3 weeks ago
- This is the public repository for the RING PyMOL plugin developed by the BioComputing UP laboratory at the University of Padua☆23Updated 7 months ago
- ☆13Updated last year
- Pipeline for protein-protein interaction prediction☆14Updated 2 years ago
- ☆24Updated last month
- Fraction of Common Contacts Clustering Algorithm for Protein Structures☆25Updated 3 years ago
- ColabFold protocol☆22Updated 2 months ago
- Protein-protein binding affinity benchmark☆12Updated 4 years ago
- An open-source library for the analysis of protein interactions.☆29Updated 2 years ago
- A tool for accurate prediction of a protein's secondary structure from only it's amino acid sequence☆46Updated last month
- Generate Ramachandran plots for single PDB structure and as heatmap for MD trajectory☆10Updated 2 years ago
- ATTRACT program suite for macromolecular docking (protein-protein, protein-nucleic acid, protein-peptide)☆15Updated 7 months ago
- A Python toolkit to compute molecular features and predict activities and properties of small molecules☆18Updated 2 years ago
- Framework for the rapid modeling glycans and glycoproteins.☆28Updated 11 months ago
- ☆27Updated 4 months ago