saeyslab / moduledetection-evaluation
☆32Updated 3 years ago
Alternatives and similar repositories for moduledetection-evaluation:
Users that are interested in moduledetection-evaluation are comparing it to the libraries listed below
- ☆57Updated 4 years ago
- Geometry-preserving random sampling☆79Updated 4 months ago
- This is a tutorial to guide the analysis of RNAseq dataset using footprint based tools such as DOROTHEA, PROGENY and CARNIVAL☆55Updated last year
- R package to access DoRothEA's regulons☆142Updated last year
- Tutorials and code for ISMB 2019 short course on Recent Advances in Statistical Methods and Computational Algorithms for Single-Cell Omic…☆39Updated 5 years ago
- Grouping of Lymphocyte Interactions by Paratope Hotspots☆91Updated 4 years ago
- Material for lecture at the EMBL Single Cell Course 2016☆47Updated 8 years ago
- Clonotype Neighbor Graph Analysis☆83Updated 5 months ago
- Tools for single-cell data processing☆122Updated 9 months ago
- Code related to the Celligner manuscript☆46Updated 4 years ago
- ☆127Updated last year
- collection of notebooks with different cytoscape workflows☆49Updated last year
- kallisto | bustools workflow for pre-processing single-cell RNA-seq data☆117Updated 2 years ago
- Tools for working with BUS files☆93Updated 4 months ago
- ☆64Updated last year
- ☆55Updated 6 years ago
- ISCB DC Area Regional Student Group - Summer 2016 Workshop☆48Updated 8 years ago
- A repository of pipelines for single-cell data in Nextflow DSL2☆75Updated last year
- A repository for the design and analysis of pooled single cell RNA-seq perturbation experiments.☆87Updated 5 years ago
- Single-Cell Clustering Assessment Framework☆99Updated last year
- ☆61Updated last year
- An R interface to enrichR☆90Updated last month
- ☆46Updated 2 years ago
- pseudobulking on an AnnData object☆28Updated last year
- metadata and data from the database☆38Updated 5 years ago
- Code for the MNN manuscript figures☆51Updated 6 years ago
- Benchmarking computational single cell ATAC-seq methods☆180Updated 4 years ago
- Compendium to "A Systematic Evaluation of Single Cell RNA-Seq Analysis Pipelines"☆53Updated 4 years ago
- Integrative pathway enrichment analysis of multivariate omics data☆106Updated 7 months ago
- Filtering of Poison noise on a single-cell RNA-seq UMI count matrix☆70Updated last year