Codebase for the domain adaptation (cross-species TF binding prediction) project.
☆12Aug 29, 2022Updated 4 years ago
Alternatives and similar repositories for cross-species-domain-adaptation
Users that are interested in cross-species-domain-adaptation are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Interpretable bimodal network for transcription factors binding site prediction☆10Jun 29, 2023Updated 3 years ago
- ☆14Sep 1, 2024Updated 2 years ago
- ☆17Sep 16, 2021Updated 5 years ago
- SNp Exploration and Analysis using EPigenomics data☆12Jan 14, 2025Updated last year
- NeuronMotif: deciphering cis-regulatory codes by layerwise demixing of deep neural networks☆16Jun 19, 2023Updated 3 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- Brief tutorial illustrating gprof and AMD uProf☆10Aug 8, 2024Updated 2 years ago
- A DL-based framework for sequence and shape motif identification in the human genome☆12May 26, 2023Updated 3 years ago
- ExplaiNN: interpretable and transparent neural networks for genomics☆48Apr 1, 2025Updated last year
- This computational method has been published in BMC genomics as: "Identifying branch-specific positive selection throughout the regulato…☆18Jun 15, 2026Updated 3 months ago
- Differential expression analysis: DESeq2, edgeR, limma. Realized in python based on rpy2☆15May 7, 2021Updated 5 years ago
- ☆12Nov 9, 2020Updated 5 years ago
- The main repository for ACTIVA: realistic single-cell RNA-seq generation with automatic cell-type identification using introspective vari…☆10Jan 23, 2023Updated 3 years ago
- Modeling the genomic regulatory codes of fly, mouse, worm, and fish with deep learning☆17Apr 6, 2021Updated 5 years ago
- PanEffect is a JavaScript framework to explore variant effects across a pangenome. The tool has two views that allows a user to (1) expl…☆13Jan 30, 2024Updated 2 years ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- LoopPredictor: Predicting unknown enhancer-mediated genome topology by an ensemble machine learning model☆14Jun 18, 2021Updated 5 years ago
- Regulatory Genomics Toolbox: Python library and set of tools for the integrative analysis of high throughput regulatory genomics data.☆113Nov 3, 2025Updated 10 months ago
- modules for Nepali language processing☆13Dec 31, 2017Updated 8 years ago
- TF MOtif Discovery from Importance SCOres☆190Sep 4, 2026Updated 2 weeks ago
- ☆15Sep 14, 2021Updated 5 years ago
- An efficient tool for large-scale correlation network analysis☆15Dec 27, 2024Updated last year
- ☆27May 29, 2023Updated 3 years ago
- ☆15Sep 14, 2021Updated 5 years ago
- ☆12Jan 12, 2024Updated 2 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- ☆14Jul 9, 2023Updated 3 years ago
- NeuronMotif: deciphering cis-regulatory codes by layerwise demixing of deep neural networks☆11Dec 3, 2023Updated 2 years ago
- python wrapper to dpryan79's bigwig library using cffi☆19May 13, 2016Updated 10 years ago
- A repository containing link to some my Kaggle starter Notebooks☆11Jun 1, 2020Updated 6 years ago
- Assessing the reproducibility of proccessed ChIP-seq peaks☆14Mar 7, 2021Updated 5 years ago
- Reproducing the experiments in the paper☆11Dec 14, 2021Updated 4 years ago
- ☆33Oct 4, 2021Updated 4 years ago
- Useful functions for manipulating Multiplex Assay of Variant Effect datasets.☆11Feb 6, 2025Updated last year
- The implementation of paper "HPOFiller: identifying missing protein-phenotype associations by graph convolutional network".☆12Dec 24, 2020Updated 5 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- BICSEQ2 pipeline for processing CPTAC3 somatic WGS CNA☆16Apr 13, 2021Updated 5 years ago
- Build DeepSea training dataset from raw data☆32Jul 6, 2023Updated 3 years ago
- Scripts for making Hadoop deployments in AWS easy☆10Feb 26, 2014Updated 12 years ago
- A machine-learning algorithm to predict CTCF-mediated long-range chromatin interactions☆17Nov 7, 2018Updated 7 years ago
- ☆13Nov 29, 2017Updated 8 years ago
- In-silico Saturation Mutagenesis implementation with 10x or more speedup for certain architectures.☆22Jun 18, 2022Updated 4 years ago
- Code for reproducing the Sei manuscript results☆17Jan 25, 2022Updated 4 years ago