Manipulate KEGG networks as NetworkX objects in in Python
☆10Jan 21, 2022Updated 4 years ago
Alternatives and similar repositories for keggx
Users that are interested in keggx are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Library for KEGG pathway enrichment analysis☆19Jul 12, 2026Updated last week
- MCP server for single cell analysis☆12May 15, 2025Updated last year
- ☆17Oct 10, 2021Updated 4 years ago
- Jupyter notebooks for CellProfiler and friends☆14Mar 23, 2018Updated 8 years ago
- Dorothea package in Python☆11Apr 5, 2022Updated 4 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Graph algorithms based on the Rust "petgraph" library.☆32Jul 12, 2025Updated last year
- ☆11Aug 10, 2023Updated 2 years ago
- 命例☆10Sep 27, 2018Updated 7 years ago
- ☆26Jan 9, 2024Updated 2 years ago
- Python tutorials for scientific computing☆10Oct 23, 2012Updated 13 years ago
- ☆19Nov 26, 2020Updated 5 years ago
- Attempt at phillip rewrite in rllib. Also attempts at training from slippi replays.☆19Oct 5, 2019Updated 6 years ago
- Learning meaningful representations of genes☆21Jul 7, 2025Updated last year
- a simple R data package for curated cancer pathway-specific gene lists☆13Mar 31, 2020Updated 6 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- DyNoPy☆11Sep 5, 2024Updated last year
- Simple scVI implementation☆13Jul 13, 2026Updated last week
- A Cytoscape app for importing KGML(KEGG pathway XML)☆26Mar 13, 2026Updated 4 months ago
- Implementation of Stochastic Depth Networks in Keras☆13Sep 10, 2016Updated 9 years ago
- ☆10Feb 3, 2020Updated 6 years ago
- ☆11Sep 22, 2021Updated 4 years ago
- ☆14May 9, 2024Updated 2 years ago
- A notebook containing implementations of different graph deep node embeddings along with benchmark graph neural network models in tensorf…☆13Jul 17, 2021Updated 5 years ago
- A small wrapper around darknet☆12Nov 14, 2017Updated 8 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- [PAKDD2023] Improving Knowledge Graph Entity Alignment with Graph Augmentation☆12Nov 16, 2023Updated 2 years ago
- Processed Cell Painting Data for the LINCS Drug Repurposing Project☆36Aug 4, 2022Updated 3 years ago
- Finds the optimal stem configuration of an RNA sequence using the LeapHybridCQMSampler.☆17Oct 31, 2023Updated 2 years ago
- Ornstein-Uhlenbeck models for phylogenetic comparative hypotheses☆16Mar 23, 2026Updated 3 months ago
- ☆23Jul 9, 2019Updated 7 years ago
- This repository provides an implementation of the DTi2Vec tool, to identify Drug-Target interaction using network embedding and ensemble …☆12Sep 28, 2021Updated 4 years ago
- ☆13Apr 1, 2023Updated 3 years ago
- SSR: A Unifed Framework for Prediction in Secondary Structure of RNA. 整合了LinearFold, E2Efold, MXfold2算法,包含数据集,欢迎一键使用。☆10Dec 31, 2021Updated 4 years ago
- Tumor-Infiltrating CD8 Lymphocytes states prediction☆14Feb 7, 2024Updated 2 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Supervised Dimensionality Reduction and Classification with Convolutional Autoencoders☆11Nov 4, 2022Updated 3 years ago
- Clann: Investigation of phylogenomic signal using supertrees☆18Updated this week
- Automatic layout of labels for features in a plot.☆36Mar 24, 2018Updated 8 years ago
- ☆12Feb 10, 2023Updated 3 years ago
- VEGA: VAE Enhanced by Gene Annotations☆18May 5, 2022Updated 4 years ago
- An Alfred workflow for setting daily notes in Roam, including a retrospective space☆29Jan 7, 2021Updated 5 years ago
- Custom Keras Callbacks for Feature Visualization, Class Activation Map, Grad-CAM☆16Apr 28, 2021Updated 5 years ago