Linear Models for Microarray Data
☆14Apr 2, 2014Updated 12 years ago
Alternatives and similar repositories for limma
Users that are interested in limma are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- R package to estimate kinship and FST from SNP data☆21Jan 27, 2026Updated 7 months ago
- ☆28Jul 18, 2024Updated 2 years ago
- Bayesian model selection approach for mediation☆12Apr 17, 2023Updated 3 years ago
- Converter functions for the MSstats package☆12Sep 12, 2026Updated last week
- R package for univariate time series cleaning.☆11Sep 30, 2023Updated 2 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- GESTALT processing pipeline for barcodes captured with single-cell RNA sequencing☆13Jan 26, 2020Updated 6 years ago
- ☆20Sep 25, 2020Updated 5 years ago
- Tutorials☆15Apr 2, 2022Updated 4 years ago
- Python implementation of de Bruijn graph for genome assembly☆13May 24, 2014Updated 12 years ago
- Clone of the Bioconductor repository for the RUVSeq package, see https://bioconductor.org/packages/devel/bioc/html/RUVSeq.html for the of…☆16Nov 22, 2022Updated 3 years ago
- dendrograms in ggplot2.☆10Jul 7, 2021Updated 5 years ago
- Code for the analysis performed in the paper "Transcription factor stoichiometry, motif affinity and syntax regulate single-cell chromati…☆15Oct 16, 2025Updated 11 months ago
- A clustering algorithm that can perform internal validation inspired by forest fire dynamics and self-organized criticality☆18May 18, 2022Updated 4 years ago
- Standard regression functions in R enabled for parallel processing over large data-frames.☆38Sep 24, 2023Updated 2 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- A Shiny wrapper for the UpSetR R package (https://github.com/hms-dbmi/UpSetR).☆21Aug 28, 2017Updated 9 years ago
- Allele-Specific Expression by Single-Cell RNA Sequencing☆31Oct 15, 2020Updated 5 years ago
- multi_tbx: a simple tool for indexing VCF files and extract variant records for variant data stored in multiple VCF files.☆10Jan 7, 2022Updated 4 years ago
- Pipeline to call somatic cancer neoantigens from mutations in patient tumor DNA☆14Feb 16, 2023Updated 3 years ago
- Analyzing plant disease epidemics☆17Jun 18, 2024Updated 2 years ago
- MicrOSAtellite Instability Classifier☆15Apr 27, 2026Updated 4 months ago
- ☆13May 14, 2019Updated 7 years ago
- Testing KAN-based text generation GPT models☆19May 6, 2024Updated 2 years ago
- Z Hu et al. The repertoire of serous ovarian cancer non-genetic heterogeneity revealed by single-cell sequencing of normal fallopian tube…☆13Nov 22, 2020Updated 5 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- A python library for Collective Matrix Factorization (CMF)☆25Aug 17, 2018Updated 8 years ago
- Repository for MetaboShiny, a novel R and RShiny based metabolomics data analysis package.☆19Feb 13, 2026Updated 7 months ago
- An interactive Shiny App for UpSet plots, Venn diagrams and Pairwise heatmaps☆21Apr 3, 2018Updated 8 years ago
- V'DJer - B Cell Receptor Repertoire Reconstruction from short read mRNA-Seq data☆29Aug 9, 2022Updated 4 years ago
- Lineage Tracing by Integrating Mutation and Transcriptomic data☆13Jun 16, 2020Updated 6 years ago
- Source code of the thesis completed as part of the COMPGW99 - MSc Thesis module (MSc Web Science and Big Data Analytics) at University Co…☆14Dec 2, 2017Updated 8 years ago
- A package for shrinkage estimation of covariance matrices☆16Feb 8, 2024Updated 2 years ago
- Algorithms for single-cell analysis☆29Jul 19, 2021Updated 5 years ago
- Machine Learning Workflow for Imaging Flow Cytometry (IFC)☆12Nov 15, 2017Updated 8 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Small utility to quickly find size and GC content of a fasta file. Can also extract sequence. Who doesn't like QUICK and DIRTY!☆13Aug 27, 2018Updated 8 years ago
- pathway based data integration and visualization☆51Mar 28, 2025Updated last year
- CellRegMap: A statistical framework for mapping context-specific regulatory variants using scRNA-seq☆26Aug 20, 2024Updated 2 years ago
- python based queries for the proteomesoflife neo4j network database☆14Jun 17, 2020Updated 6 years ago
- The implementation of our paper Fed-TDA☆15Jan 11, 2023Updated 3 years ago
- Stack denoising autoencoder (SdA) code in "Deep learning based functional site-level and UTR-level human miRNA target prediction"☆11May 7, 2019Updated 7 years ago
- This tool designs guides for use with the base editor technology.☆12Aug 11, 2023Updated 3 years ago