Gene Set Clustering based on Functional annotation
☆24May 3, 2024Updated 2 years ago
Alternatives and similar repositories for GeneSCF
Users that are interested in GeneSCF are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆10Sep 27, 2022Updated 3 years ago
- Freddie: Annotation-independent detection and discovery of transcriptomic alternative splicing isoforms using long-read sequencing☆16Nov 29, 2022Updated 3 years ago
- SEASTAR - Systematic Evaluation of Alternative transcription STArt site in RNA☆14Jan 21, 2018Updated 8 years ago
- Draw pan- and core-genome curves from proteinortho output☆13Oct 26, 2023Updated 2 years ago
- ☆11Sep 24, 2020Updated 5 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- The Genome Analysis Tutorial Page.☆13Oct 5, 2019Updated 6 years ago
- Code base for profiling highly replicated differential gene expression RNA-seq.☆11Dec 13, 2021Updated 4 years ago
- ☆15Jan 18, 2023Updated 3 years ago
- Plot bacterial gene maps and genome comparison plots from command line with genoPlotR and GenomeDiagram☆13Mar 10, 2026Updated 2 months ago
- Calculate fastq reads and sequencing coverage☆15Oct 20, 2020Updated 5 years ago
- Peptide Virtual Screening Pipeline☆14Jul 3, 2019Updated 6 years ago
- A convenient pipeline for processing of multi-strain bacterial RNA-Seq experiments☆11Dec 1, 2020Updated 5 years ago
- ☆33Oct 4, 2021Updated 4 years ago
- iread☆25Jul 16, 2021Updated 4 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Dynamical systems methods for RNA velocity analysis☆24May 19, 2021Updated 5 years ago
- Wrapper for the genoPlotR R package. This wrapper makes phylogeny, genbank files and blast comparisons that is needed for the genoPLotR p…☆14Oct 5, 2021Updated 4 years ago
- Script for parsing and displaying node status information of the HPC Sapelo2 at UGA.☆11Nov 9, 2020Updated 5 years ago
- Genome Analysis Pipeline for Lecture☆20May 12, 2021Updated 5 years ago
- ☆29Sep 28, 2021Updated 4 years ago
- Webpage of the "Introduction to RNA-Seq: From quality control to pathway analysis - streamed" SIB course.☆16Sep 29, 2025Updated 7 months ago
- Highly scalable integration and classification of single-cell RNA sequencing data☆11Dec 27, 2020Updated 5 years ago
- HAT is a set of tools for calling de novo variants from whole-genome sequencing data.☆24Nov 18, 2025Updated 6 months ago
- doit plugin: Generates a graph of tasks (using graphviz's dot)☆19Aug 11, 2019Updated 6 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- A JBrowse plugin for creating sashimi or junction style plots from RNA-seq data☆14Apr 30, 2021Updated 5 years ago
- Drab (DOM access from the server) proof-of-concept and playground☆19Jan 11, 2019Updated 7 years ago
- Cellsnake tool main repo☆36Feb 22, 2024Updated 2 years ago
- Isoform-level expression patterns in single-cell RNA-sequencing data☆12Apr 20, 2023Updated 3 years ago
- Benchmarking of aligners and variant callers for Whole Exome Sequencing data☆20Dec 4, 2018Updated 7 years ago
- Cell age determination by scATAC-seq and bulk-ATAC-seq☆33Jan 30, 2026Updated 3 months ago
- Structure Harvester is a program for parsing the output of Pritchard's STRUCTURE and for performing the Evanno method.☆35Jul 9, 2022Updated 3 years ago
- Interactive visulizations for track-based genomic data in R☆15Sep 9, 2024Updated last year
- Making whole bacterial genome sequencing data analysis easy☆113Apr 22, 2025Updated last year
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Total copy number inference from single-cell RNA and ATAC sequing with cell clustering☆12Oct 31, 2024Updated last year
- MOJITOO: a fast and universal method for integration of multimodal single cell data☆12Oct 23, 2024Updated last year
- ☆32Dec 29, 2023Updated 2 years ago
- A tool for concatenating multiple fasta alignments for supermatrix phylogenetic analyses☆24Apr 30, 2026Updated 2 weeks ago
- ☆23Aug 22, 2019Updated 6 years ago
- ASimulatoR: splice-aware RNA-seq data simulation https://doi.org/10.1093/bioinformatics/btab142☆11Sep 6, 2022Updated 3 years ago
- ☆34Apr 20, 2026Updated last month