A pilot experiment to dissminate information about Janelia's biomaging data formats.
☆12Jan 30, 2025Updated last year
Alternatives and similar repositories for JaneliaDataStandards
Users that are interested in JaneliaDataStandards are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A framework for easy application of established machine learning techniques on large, multi-dimensional images.☆60Apr 24, 2026Updated 3 weeks ago
- Pydantic models for OME-NGFF☆24Sep 14, 2025Updated 8 months ago
- simple standalone BigDataViewer for multiple N5 (or HDF5) datasets☆12Mar 6, 2026Updated 2 months ago
- A tutorial of classical shape analysis methods☆11Nov 25, 2023Updated 2 years ago
- Storing and accessing large Julia array locally or in cloud storage without server.☆13Jan 29, 2022Updated 4 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- scalable multiscale image pyramids in python☆29Jul 25, 2024Updated last year
- Multiple particle tracking in dense 3D particle fields complemented with dynamic regions of interest and trackability inferences for the …☆30Mar 12, 2026Updated 2 months ago
- 3D/4D volumetric rendering of microscopy data☆27Apr 15, 2026Updated last month
- Running compute-intense parts of BigStitcher distributed☆30Updated this week
- ☆10Updated this week
- A portal for viewing FIB-SEM datasets☆13Updated this week
- ☆19Nov 12, 2025Updated 6 months ago
- Janelia Workstation☆28Apr 15, 2026Updated last month
- The RPC library used in ImJoy.☆25Jul 23, 2024Updated last year
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Icons describing multiple microscopy techniques, as used by https://www.epfl.ch/research/facilities/ptbiop/equipment/☆11Mar 13, 2023Updated 3 years ago
- GIve easy, high-level access to ome-zarr fileset☆22Sep 22, 2025Updated 7 months ago
- A Board Game to teach co-localization analysis☆15Nov 1, 2024Updated last year
- Repo contains the implementation of the count-ception CNN (Tensorflow + Keras)☆11Oct 25, 2017Updated 8 years ago
- convert between Z-order, Cartesian, and quadtree/octree coordinates☆23Aug 3, 2022Updated 3 years ago
- Zarr core protocol for storage and retrieval of N-dimensional typed arrays☆107Sep 26, 2025Updated 7 months ago
- ☆113Updated this week
- Differentiable wave optics using JAX! Documentation can be found at https://chromatix.readthedocs.io☆163Apr 29, 2026Updated 2 weeks ago
- SCIFIO ImageIO plugin for ITK☆16Apr 23, 2026Updated 3 weeks ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- Encoding multichannel fluorescence and hyperspectral images☆12Nov 6, 2024Updated last year
- Work towards creating a common JSON based format for compact network specification☆14Jan 6, 2026Updated 4 months ago
- A minimal Python package for reading, writing and validating OME-Zarr (meta)data☆38Updated this week
- N-dimensional arrays, with Zarr and HDF5 integrations☆19Feb 26, 2019Updated 7 years ago
- Fixed-length strings in Julia represented by NTuples☆14Feb 20, 2026Updated 3 months ago
- Julia package providing curated system images☆12Jan 1, 2025Updated last year
- ☆41Jul 23, 2024Updated last year
- Block-wise task scheduling for large nD volumes.☆32May 4, 2026Updated 2 weeks ago
- The computational platform u-signal3D defines a shape-invariant representation of the spatial scales of molecular organization at the cel…☆11Mar 12, 2026Updated 2 months ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- my dissertation!☆11Sep 6, 2022Updated 3 years ago
- ☆17Jul 4, 2022Updated 3 years ago
- Pydantic models for Zarr☆47Apr 29, 2026Updated 2 weeks ago
- Java implementation of the Zarr Specification☆20May 4, 2026Updated 2 weeks ago
- Utility package to help migrate environments by copying Project.toml and Manifest.toml☆11Sep 30, 2024Updated last year
- LaTeX templates for manuscripts. bioRxiv preprint and journal submission templates. For use on Overleaf.☆19Jan 21, 2026Updated 3 months ago
- ☆11Apr 5, 2024Updated 2 years ago