saalfeldlab / n5-viewerLinks
BigDataViewer-based tool for visualizing multichannel multiscale N5 datasets.
☆19Updated last month
Alternatives and similar repositories for n5-viewer
Users that are interested in n5-viewer are comparing it to the libraries listed below
Sorting:
- Reconstruct big images from overlapping tiled images on a Spark cluster.☆34Updated 2 years ago
- ImageJ convenience layer for N5☆19Updated last month
- High quality visualization for volumetric image data☆54Updated 2 weeks ago
- Online documentation and reference for CLIJ☆28Updated 4 years ago
- ☆23Updated 4 years ago
- MultiModal Big Image Data Sharing and Exploration☆18Updated 2 years ago
- ImgLib2/BDV implementation of Stitching for large datasets☆78Updated last month
- python tools for BigDataViewer☆22Updated last year
- Create 3D/4D animations using a natural language-based syntax☆61Updated 6 months ago
- ☆41Updated last week
- Project planning and material repository for the 2024 challenge to generate 1 PB of OME-Zarr data☆20Updated 2 months ago
- Resources for teaching/preparing to teach bioimage analysis☆58Updated last month
- The known BioVoxxel Toolbox functions now improved for 2D and 3D images☆17Updated last month
- some useful function to get Label from ROIs and vice versa , and more!☆11Updated 2 years ago
- An automated point-set based registration algorithm for correlative light and electron microscopy (CLEM)☆19Updated 2 months ago
- Detect morphological motifs, such as blebs, filopodia, and lamellipodia, from 3D images of surfaces, particularly images of cell surfaces…☆30Updated 8 months ago
- A napari plugin for stitching large multi-positioning datasets in 2/3D+t using multiview-stitcher☆16Updated 5 months ago
- Generate markdown notebooks from ImageJ Macro☆26Updated 4 years ago
- Python module for registering and fusing multi-view microscopy data☆24Updated 9 months ago
- GPU-accelerated Image Processing library for C++☆16Updated last week
- Napari Visualization tool for Trackmate > 6.0 XML files for 2/3D + time tracks. Available via pip package napatrackmater.☆18Updated 2 months ago
- Process images using SimpleITK in napari☆23Updated 7 months ago
- Tools for distributed alignment of massive images☆91Updated last week
- ☆13Updated 5 years ago
- Accelerated Pixel and Object Classifiers (APOC)☆59Updated 5 months ago
- The ImageJ wiki☆28Updated last week
- Easily read and write ome-tiff images in python☆28Updated last year
- Python package for writing 5D numpy arrays to HDF5 files readable by both Imaris and BigDataViewer☆12Updated 4 years ago
- Process and analyze surfaces using vedo in napari.☆25Updated last year
- A lean and kind Open Microscopy Environment (OME) Next Generation File Format (NGFF) Zarr implementation.☆55Updated this week