BigDataViewer-based tool for visualizing multichannel multiscale N5 datasets.
☆21Jul 10, 2026Updated 2 weeks ago
Alternatives and similar repositories for n5-viewer
Users that are interested in n5-viewer are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- browsing large volumetric data and shapes☆21Jul 10, 2026Updated 2 weeks ago
- simple standalone BigDataViewer for multiple N5 (or HDF5) datasets☆12Mar 6, 2026Updated 4 months ago
- ImageJ convenience layer for N5☆21Jun 29, 2026Updated 3 weeks ago
- Render transformed image tiles☆37Updated this week
- How to use Aligning Big Brains and Atlases with Python☆14May 3, 2023Updated 3 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- A tool for manual pointwise deformable registration using bigdataviewer.☆37Jun 4, 2026Updated last month
- GPU-accelerated Image Processing library for C++☆16Updated this week
- Not HDF5☆203Updated this week
- Zarr filesystem backend for N5☆21Jun 18, 2026Updated last month
- ☆41Jul 24, 2024Updated 2 years ago
- Experimental micro-service for implementing the Zarr spec over HTTP☆21May 25, 2026Updated 2 months ago
- Calcium imaging inter-session alignment☆17Jun 8, 2026Updated last month
- Next-generation file format (NGFF) specifications for storing bioimaging data in the cloud.☆166Jul 17, 2026Updated last week
- ☆116Updated this week
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ☆21Jul 2, 2026Updated 3 weeks ago
- ☆40May 6, 2024Updated 2 years ago
- Scalable Neuroglancer compatible Downsampling, Meshing, Skeletonizing, Contrast Normalization, Transfers and more.☆69Updated this week
- Jython 3: Python 3 for Java☆10May 14, 2021Updated 5 years ago
- Napari Visualization tool for Trackmate > 6.0 XML files for 2/3D + time tracks. Available via pip package napatrackmater.☆18Oct 8, 2025Updated 9 months ago
- Image processing pipeline to correct motion artifacts and complex image distortions in neuronal calcium imaging data.☆28Dec 21, 2023Updated 2 years ago
- ☆12Jan 10, 2021Updated 5 years ago
- Bio-Formats image file format to raw format converter☆110Jun 30, 2026Updated 3 weeks ago
- ☆15Mar 2, 2026Updated 4 months ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- The framework for quantification of neuronal anatomy☆60Updated this week
- Lightweight C++ and Python interface for datasets in zarr and N5 format☆133Jul 2, 2026Updated 3 weeks ago
- Basic example of using OME-Zarr in a Nextflow pipeline☆21Jul 15, 2025Updated last year
- Benchmarking Large Language Models for Bio-Image Analysis Code Generation☆25Jun 3, 2026Updated last month
- A sine/square waveform generator using Teensy 3.1☆11May 19, 2015Updated 11 years ago
- Code for processing and analyzing the automated reconstruction of the Lee lab's Female Adult Nerve Cord EM dataset☆15May 6, 2026Updated 2 months ago
- Software for the reconstruction of multi-view microscopic acquisitions like Selective Plane Illumination Microscopy (SPIM) Data☆33Jul 7, 2026Updated 2 weeks ago
- RNN autoencoder example in PyTorch☆11Feb 18, 2019Updated 7 years ago
- Plug-in inkscape for XYZ plotter kit to generate Gcode inside Inkscape☆13Aug 16, 2021Updated 4 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- ☆11May 2, 2022Updated 4 years ago
- scripts for using spark on janelia's cluster☆12Nov 12, 2023Updated 2 years ago
- ☆11Jul 2, 2026Updated 3 weeks ago
- Helpers to use BigDataViewer as a quick visualization tool in other projects.☆26Jun 13, 2024Updated 2 years ago
- 🚚 AutoTx 🪄 - a smart background file transfer service for Windows.☆28Jul 8, 2026Updated 2 weeks ago
- Work towards creating a common JSON based format for compact network specification☆14Jun 24, 2026Updated last month
- Open source SMLM microscope designs☆13May 31, 2023Updated 3 years ago