This package has migrated to https://github.com/rezakj/iCellR please use iCellR instead of scSeqR for more functionalities and updates.
☆16Oct 29, 2025Updated 10 months ago
Alternatives and similar repositories for scSeqR
Users that are interested in scSeqR are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Repository for MetaboShiny, a novel R and RShiny based metabolomics data analysis package.☆19Feb 13, 2026Updated 6 months ago
- Bayesian MCMC matrix factorization algorithm☆74Aug 12, 2026Updated 3 weeks ago
- ☆21Sep 25, 2018Updated 7 years ago
- deconstructSigs☆145Apr 24, 2023Updated 3 years ago
- Sliding Window Inference for Network Generation☆10Feb 14, 2018Updated 8 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- hyb: a bioinformatics pipeline for the analysis of CLASH (crosslinking, ligation and sequencing of hybrids) data☆14Jul 12, 2024Updated 2 years ago
- Modelling DNA methylation profiles☆24Jul 16, 2020Updated 6 years ago
- Integrated platform for unifying scientific workflow management and graph databases for transcriptome data analysis.☆10Oct 19, 2018Updated 7 years ago
- v1 of Org-roam. No longer actively maintained.☆13Jul 10, 2021Updated 5 years ago
- Scasat is a single cell ATAC-seq preprocessing and analysis pipeline☆35Feb 27, 2019Updated 7 years ago
- Analysis pipelines for genomic sequencing data☆74Aug 31, 2026Updated last week
- ☆13Dec 1, 2021Updated 4 years ago
- An example of a Shiny web app using networkD3 graphs☆15Jan 19, 2015Updated 11 years ago
- ATAC-seq Pipeline in conjunction with Duygu Ucar & Jacques Banchereau Laboratories☆12Apr 3, 2019Updated 7 years ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- A mod for Duskers that allows you to spawn upgrades on your drones☆13Sep 5, 2021Updated 5 years ago
- A suite of population scale analysis tools for single-cell genomics data including implementation of Demuxlet / Freemuxlet methods and au…☆59May 5, 2021Updated 5 years ago
- 🍄 But our princess is in another castle!☆21Dec 10, 2021Updated 4 years ago
- PathOS is a clinical application for filtering, analysing and reporting on NGS variants☆29Mar 30, 2021Updated 5 years ago
- visualize CNV data from targeted capture based sequencing data☆36May 10, 2021Updated 5 years ago
- Python-based UCSC genome browser snapshot-taker and gallery-maker☆12May 21, 2024Updated 2 years ago
- mesa package for Methylation Enrichment Sequencing Analysis☆16Jul 28, 2026Updated last month
- A little Python software that creates a color-sorted image from any image☆10Jun 12, 2017Updated 9 years ago
- ☆10May 17, 2017Updated 9 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- A tutorial for DLS-2 migration☆28Sep 16, 2019Updated 6 years ago
- SCRAT: Single-Cell Regulome Analysis Tool☆16Apr 4, 2020Updated 6 years ago
- ☆11Oct 8, 2018Updated 7 years ago
- A neural network library based on tensorflow and with true sklearn compatibility.☆11Sep 17, 2016Updated 9 years ago
- Source code for ScanGEO Shiny App☆15Apr 18, 2022Updated 4 years ago
- ☆12Jan 27, 2022Updated 4 years ago
- ☆63Jun 17, 2021Updated 5 years ago
- Explore the Hi-Cs☆12Jul 25, 2026Updated last month
- Single-cell Transcriptome and Regulome Analysis Pipeline☆311Mar 6, 2023Updated 3 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Pipeline to analyse ChIP-Rx data, i.e ChIP-Seq with reference exogenous genome spike-in normalization☆14Apr 11, 2026Updated 4 months ago
- official build specifications for jupyter☆13Jun 3, 2021Updated 5 years ago
- ☆19Jun 23, 2020Updated 6 years ago
- Expedition suite for computing, visualizing, and analyzing single-cell alternative splicing data☆11Jun 29, 2017Updated 9 years ago
- Genotype-free demultiplexing of pooled single-cell RNA-Seq, using a hidden state model for identifying genetically distinct samples withi…☆42Feb 8, 2023Updated 3 years ago
- ☆33Oct 27, 2020Updated 5 years ago
- Private, Modular, Publicly-Available Genome Interpretation Engine☆20Aug 3, 2016Updated 10 years ago