pbastide / PhylogeneticEMLinks
Implementation of the EM algorithm for the detection of shifts in a phylogeny.
☆18Updated 4 months ago
Alternatives and similar repositories for PhylogeneticEM
Users that are interested in PhylogeneticEM are comparing it to the libraries listed below
Sorting:
- Phylogenetic Comparative Tools for Missing Data and Within-Species Variation☆32Updated 3 years ago
- Functions for phylogenetic analyses☆36Updated 2 months ago
- diversitree: comparative phylogenetic analyses of diversification☆33Updated last year
- An R pakage to calculate diversity through Hill Numbers☆36Updated 2 months ago
- ☆36Updated last year
- babette is an R package to work with BEAST2☆46Updated last month
- phylogenetic networks using ggplot2 and ggtree☆11Updated 3 months ago
- rtrees: an R package to assemble phylogenetic trees from mega-trees☆36Updated 5 months ago
- A book for teaching people how to do comparative methods in R☆22Updated 2 years ago
- Basic Tools for the Analysis of Disease Outbreaks☆12Updated 6 years ago
- R package to perform sensitivity analysis for comparative methods☆14Updated 5 years ago
- R package to reconstruct ancestral networks inferred with RevBayes☆13Updated 7 months ago
- Dendrograms for Evolutionary Analysis☆12Updated 6 years ago
- ☆23Updated 9 months ago
- Create, modify and analyse phylogenetic trees in R☆23Updated 2 weeks ago
- Computes affinity between two entities based on their co-occurrence☆28Updated 6 months ago
- ☆19Updated this week
- R package to run BEAST2☆11Updated last month
- Perform phylogenetic path analysis in R.☆13Updated 4 months ago
- ☆23Updated this week
- a take on ordination plots using ggplot2☆65Updated last year
- asremlPlus is an R package that augments the use of 'ASReml-R' and 'ASReml4-R' in fitting mixed models☆20Updated 2 months ago
- taxonomy R packages☆44Updated last year
- Interface to Open Tree of Life API☆46Updated last week
- R package to generate the same BEAST2 XML parameter files as generated by BEAUti 2☆13Updated last month
- Machuruku☆32Updated last year
- Conditional Auto-Regressive LASSO in R☆20Updated 3 years ago
- Utilities and distributions for (birth-death) skyline models.☆10Updated 6 years ago
- R tools for integrating phylogenies and ecology☆37Updated 2 years ago
- A textbook for phylogenetic comparative methods.☆43Updated 6 years ago