Alternatives and similar repositories for supersmart

Users that are interested in supersmart are comparing it to the libraries listed below

• nmatzke / BioGeoBEARS
  BioGeography with Bayesian (and likelihood) Evolutionary Analysis with R Scripts
  ☆68Updated 3 months ago
• sculab / RASP
  Reconstruct Ancestral State in Phylogenies
  ☆21Updated last year
• HullUni-bioinformatics / metaBEAT
  Metabarcoding analyses pipeline - metaBarcoding and Environmental DNA Analysis Tool
  ☆19Updated 6 years ago
• wxguillo / machuruku
  Machuruku
  ☆32Updated 5 months ago
• nmatzke / BEASTmasteR
  R code for writing Beast2 XML (especially morphology/tip-dating)
  ☆11Updated last year
• hmorlon / PANDA
  Phylogenetic ANalyses of DiversificAtion
  ☆24Updated 6 months ago
• macroevolution / bamm
  A program for multimodel inference on speciation and trait evolution
  ☆33Updated 7 years ago
• nstenz / TICR
  ☆26Updated 4 years ago
• blackrim / treePL
  Phylogenetic penalized likelihood
  ☆49Updated 3 weeks ago
• khabbazian / l1ou
  Detection of evolutionary shifts in Ornstein-Uhlenbeck models
  ☆20Updated 2 years ago
• lmcai / PhyloHerb
  PHYLOgenomic analysis pipeline for HERBarium specimens
  ☆17Updated 2 months ago
• simjoly / CourseComparativeMethods
  Examples of application of comparative methods in R
  ☆59Updated 2 years ago
• ropensci / babette
  babette is an R package to work with BEAST2
  ☆46Updated last month
• gehara / PipeMaster
  An R Package to build and simulate coalescent models
  ☆20Updated last year
• NESCent / r-popgen-hackathon
  Population Genetics Hackathon, to be held at NESCent on March 16-20, 2015
  ☆18Updated 10 years ago
• mossmatters / phyloscripts
  Helper scripts for processing and visualization of phylogenetics datasets
  ☆29Updated last year
• fkeck / phylosignal
  Exploring the Phylogenetic Signal in Continuous Traits
  ☆18Updated last month
• ropensci / chromer
  package for interacting with the chromosome counts database (CCDB) at https://taux.evolseq.net/CCDB_web/
  ☆12Updated last year
• grunwaldlab / poppr
  🌶 An R package for genetic analysis of populations with mixed (clonal/sexual) reproduction
  ☆71Updated last month
• wtesto / SpeciesOccurrenceMapping
  Species occurrence dot maps in R
  ☆21Updated 3 years ago
• thej022214 / corHMM
  Fits a generalized form of the covarion model that allows different transition rate classes on different portions of a phylogeny by treat…
  ☆13Updated 3 weeks ago
• trayc7 / DPPDiv
  DPPDIV
  ☆12Updated 5 years ago
• gbradburd / conStruct
  method for modeling continuous and discrete population genetic structure
  ☆36Updated last year
• lukejharmon / pcm
  A textbook for phylogenetic comparative methods.
  ☆44Updated 5 years ago
• coleoguy / evobir
  R package: Evolutionary biology in R
  ☆17Updated last year
• bodkan / demografr
  Fast and simple simulation-based population genetic inference in R
  ☆27Updated last week
• liamrevell / learnPopGen
  initial commit
  ☆26Updated 2 years ago
• royfrancis / pophelper
  An R package to analyse and visualise admixture proportions from STRUCTURE, fastSTRUCTURE, TESS, ADMIXTURE etc.
  ☆150Updated last year
• FePhyFoFum / phyx
  phylogenetics tools for linux (and other mostly posix compliant) computers
  ☆119Updated 6 months ago
• mrborges23 / delta_statistic
  Codes for calculating delta, a phylogenetic analog of the Shannon entropy for measuring the degree of phylogenetic signal between a categ…
  ☆25Updated 4 years ago