☆35Nov 7, 2022Updated 3 years ago
Alternatives and similar repositories for NucleicNet
Users that are interested in NucleicNet are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆13Feb 7, 2023Updated 3 years ago
- A hierarchical deep learning framework for ncRNA-protein interaction prediction.☆14Nov 25, 2022Updated 3 years ago
- List of papers on protein binding site prediction☆11Aug 11, 2023Updated 3 years ago
- ☆21Feb 17, 2025Updated last year
- Building a DCA Frustratometer from scratch. Ultimately we aim to compare frustrated sites according to the DCA and AWSEM Frustratometers.☆17Jan 8, 2026Updated 9 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Segmentation of nucleic acid binding interface on protein surface with geometric deep learning☆15May 3, 2023Updated 3 years ago
- RNA Structural Bioinformatics Crash Course & Data Science in Python☆14Oct 19, 2022Updated 4 years ago
- to assess structural quality of RNA using 3D CNN☆15Aug 17, 2018Updated 8 years ago
- Compressed Graph Representation for Scalable Molecular Graph Generation☆11Sep 24, 2020Updated 6 years ago
- awesome tools for RNA☆17Nov 15, 2022Updated 3 years ago
- Formation continue sur la FAIRisation du code informatique☆10Jun 15, 2022Updated 4 years ago
- AnceTran2.0: R package for transcriptome evolution analysis based on RNA-seq expression data or ChIP-seq TF-binding data☆12May 19, 2019Updated 7 years ago
- RoseTTAFold2 protein/nucleic acid complex prediction☆383Jun 3, 2024Updated 2 years ago
- Generates consistent PSSM and/or PDB files for protein-protein complexes☆20Jun 26, 2022Updated 4 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- A toolkit to bulk-submission, download, analysis and summarizing data from abYsis.org☆10Apr 20, 2020Updated 6 years ago
- An implementation of the AWSEM coarse-grained protein folding forcefield in OpenMM☆39May 28, 2025Updated last year
- ☆43Oct 1, 2023Updated 3 years ago
- ☆10Dec 4, 2021Updated 4 years ago
- A 3D-equivariant neural network for protein structure accuracy estimation☆22Feb 24, 2023Updated 3 years ago
- Protein quality assessment using Graph Convolutional Networks☆28Oct 11, 2022Updated 4 years ago
- a novel approach to predict the protein solubility based on the protein sequence.☆12May 1, 2024Updated 2 years ago
- ☆10Apr 25, 2024Updated 2 years ago
- Generative diverse protein backbones by protein language model☆35Feb 27, 2026Updated 8 months ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- This is a repo used for CTBP tech talks☆13Nov 12, 2025Updated 11 months ago
- ☆11Sep 13, 2024Updated 2 years ago
- ☆13May 30, 2019Updated 7 years ago
- ☆14May 26, 2020Updated 6 years ago
- CLEAR: Self-supervised contrastive learning for integrative single-cell RNA-seq data analysis☆36Nov 30, 2022Updated 3 years ago
- ☆15Dec 13, 2025Updated 10 months ago
- DTI prediction method☆24Jan 22, 2024Updated 2 years ago
- Source code for "A novel methodology on distributed representations of proteins using their interacting ligands"☆27Feb 23, 2020Updated 6 years ago
- Deep ResNet-based protein contact prediction☆19Mar 30, 2020Updated 6 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- BSMN common data processing pipeline☆11Jun 6, 2025Updated last year
- RNA-binding protein motif analysis☆11Sep 29, 2025Updated last year
- ⚠️ Deprecated — use pdb_cpp instead. Python library for simple operations on PDB/mmCIF coordinate files.☆12Apr 1, 2026Updated 6 months ago
- GraphSite: protein-DNA binding site prediction using graph transformer and predicted protein structures☆63Aug 3, 2024Updated 2 years ago
- BFAST: the Blat-like Fast Accurate Search Tool☆12Jan 29, 2022Updated 4 years ago
- Geometric deep learning of protein–DNA binding specificity☆81Mar 19, 2025Updated last year
- Python Scripts for Bioinformatics☆15Apr 24, 2024Updated 2 years ago