Alternatives and similar repositories for NucleicNet:

Users that are interested in NucleicNet are comparing it to the libraries listed below

• luoyunan / ECNet
  An evolutionary context-integrated deep learning framework for protein engineering
  ☆63Updated 2 years ago
• biomed-AI / GraphSite
  GraphSite: protein-DNA binding site prediction using graph transformer and predicted protein structures
  ☆60Updated 6 months ago
• RosettaCommons / trRosetta2
  Repository for publicly available deep learning models developed in Rosetta community
  ☆111Updated 3 years ago
• churchlab / low-N-protein-engineering
  Code and data to reproduce analyses in Biswas et al. (2020) "Low-N protein engineering with data-efficient deep learning".
  ☆57Updated 3 years ago
• debbiemarkslab / SeqDesign
  Protein design and variant prediction using autoregressive generative models
  ☆95Updated last year
• aqlaboratory / hsm
  Code associated with "Biophysical prediction of protein-peptide interactions and signaling networks using machine learning."
  ☆71Updated 9 months ago
• robpearc / DeepFoldRNA
  ☆28Updated last year
• dohlee / antiberty-pytorch
  An unofficial re-implementation of AntiBERTy, an antibody-specific protein language model, in PyTorch.
  ☆24Updated 11 months ago
• jproney / AF2Rank
  ☆99Updated 2 years ago
• Liuxg16 / GeoPPI
  ☆79Updated 2 years ago
• dina-lab3D / CombFold
  ☆80Updated 4 months ago
• aqlaboratory / rgn2
  ☆104Updated last year
• hiranumn / DeepAccNet
  Pytorch/Python3 implementation of DeepAccNet, protein model accuracy evaluator.
  ☆84Updated 3 years ago
• varun-shanker / structural-evolution
  ☆96Updated 7 months ago
• kiharalab / GNN_DOVE
  Code for "Protein Docking Model Evaluation by Graph Neural Networks"
  ☆59Updated last year
• chloechsu / combining-evolutionary-and-assay-labelled-data
  ☆59Updated 3 years ago
• JeffSHF / ColabDock
  Code for ColabDock paper
  ☆135Updated 4 months ago
• ranganathanlab / bmDCA
  Fork of matteofigliuzzi/bmDCA repository for Boltzmann-machine Direct Coupling Analysis (bmDCA).
  ☆34Updated 4 years ago
• idmjky / EvolvePro
  PLM based active learning model for protein engineering
  ☆72Updated 6 months ago
• jertubiana / ScanNet
  ☆119Updated last year
• MachineLearningLifeScience / meaningful-protein-representations
  ☆108Updated 2 years ago
• zswitten / Antimicrobial-Peptides
  Collecting AMP MIC data from different sources, then running a GAN to output promising sequences
  ☆66Updated 6 months ago
• Rostlab / bindPredict
  Prediction of binding residues for metal ions, nucleic acids, and small molecules.
  ☆32Updated 2 months ago
• marcellszi / rna3db
  A dataset for training and benchmarking deep learning models for RNA structure prediction
  ☆45Updated 2 months ago
• sokrypton / GREMLIN_CPP
  GREMLIN - learn MRF/potts model from input multiple sequence alignment! Implementation now available in C++ and Tensorflow/Python!
  ☆53Updated 2 years ago
• soedinglab / CCMpred
  Protein Residue-Residue Contacts from Correlated Mutations predicted quickly and accurately.
  ☆107Updated last year
• AlexanderKroll / KM_prediction
  ☆32Updated 2 years ago
• eliberis / parapred
  Paratope Prediction using Deep Learning
  ☆59Updated last year
• samsledje / D-SCRIPT
  A structure-aware interpretable deep learning model for sequence-based prediction of protein-protein interactions
  ☆93Updated 5 months ago
• oxpig / ABlooper
  Tool for modelling the CDRs of antibodies
  ☆47Updated 2 years ago