Python Fundamentals for Biologists
☆40Nov 15, 2024Updated last year
Alternatives and similar repositories for Python_Fundamentals_Biology
Users that are interested in Python_Fundamentals_Biology are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- R Fundamentals for Biologists☆33Jan 25, 2025Updated last year
- Introduction to Bash for bioinformatics☆52Aug 9, 2024Updated last year
- Exploring mutual features between the 5xFAD, 3xTG-AD, and PS3O1S Alzheimer's Disease Mouse Models☆12Jan 10, 2025Updated last year
- Predictive Modeling of Gene Expression in Skeletal Muscle Using scRNA-seq☆11Oct 3, 2024Updated last year
- Assorted ML tutorials that I originally wrote for Decoding Biology☆13Aug 18, 2024Updated last year
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- A DIY guide to gene ontology, pathway, and gene set enrichment analysis☆27Aug 11, 2024Updated last year
- PhysioNexus is a open source tool that transforms complex time series data into intuitive network visualizations showing cause-and-effect…☆15Jun 24, 2025Updated 10 months ago
- A DIY Guide To BLAST Tools For Sequence Alignment☆17Aug 9, 2024Updated last year
- A DIY guide to gene co-expression network analysis☆13Mar 31, 2025Updated last year
- This repository contains math tutorials I created for Bioinformatics and Computational Biology.☆96Aug 26, 2024Updated last year
- Assorted functions for performing numerical methods and solving common problems in systems biology☆28Jan 8, 2025Updated last year
- A biotechnologist's guide to evaluating machine learning algorithms, with practical Python examples☆22Feb 10, 2025Updated last year
- Mapping DEGs to PPI Networks, Identifying Network Hubs and Highly Connected Proteins, and Simulating Genetic Circuits. An End-to-End DIY …☆27Jan 13, 2025Updated last year
- SmallSeqFlow: A streamlined, notebook-based bulk RNA-seq analysis pipeline optimized for small-sample studies with modular extensions.☆18Feb 23, 2025Updated last year
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- A growing collection of bioinformatics tutorials, project guides, tools, and articles I’ve developed to make bioinformatics more accessib…☆491Dec 26, 2025Updated 4 months ago
- A DIY Guide To Single-Cell RNA-Sequencing Analysis☆36Apr 8, 2025Updated last year
- A new tool to infer sex from massively parallel sequencing data.☆17May 16, 2025Updated 11 months ago
- A repository for reproducing experiments from the TxPert paper☆27Mar 25, 2026Updated last month
- Genome free discovery and classification of miRNAs from small RNA-Seq with random forests☆11Jun 12, 2018Updated 7 years ago
- Workflow: Convert CONTROL-freec output to GISTIC2☆10Apr 20, 2021Updated 5 years ago
- Plugin for folding sequences directly in PyMOL☆29Aug 5, 2025Updated 8 months ago
- BertSNR: an interpretable deep learning framework for single nucleotide resolution identification of transcription factor binding sites b…☆13May 27, 2025Updated 11 months ago
- Calibrated clustering with artificial variables to avoid over-clustering in single-cell RNA-sequencing☆19Nov 18, 2025Updated 5 months ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- AI-Driven Code Generation, Explanation and Execution for Data Analysis☆24Sep 11, 2024Updated last year
- instructor notes from Software Carpentry workshops☆10Jan 25, 2019Updated 7 years ago
- Microbial community-scale metabolic modeling predicts personalized short-chain-fatty-acid production profiles in the human gut☆10Jun 25, 2024Updated last year
- ☆12Aug 20, 2024Updated last year
- Introductory bioinformatics course☆25Mar 14, 2025Updated last year
- ☆10Sep 11, 2020Updated 5 years ago
- tools and notes for long reads analysis☆24Mar 31, 2025Updated last year
- A public repo for slides and exercise for the "Introduction to deep learning for biologists" Physalia course, by Nelson Nazzicari and Fil…☆24Nov 13, 2025Updated 5 months ago
- Intro to Shell for Bioinformatics - with STG examples☆28Jul 12, 2016Updated 9 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- My youtube programming scripts☆59Jan 16, 2025Updated last year
- A pipeline for for large-scale analysis of antimicrobial resistance genes and their flanking regions in metagenomic datasets☆31Nov 9, 2025Updated 5 months ago
- ☆28Sep 29, 2025Updated 7 months ago
- BiomeNED main code☆12Jul 25, 2019Updated 6 years ago
- BICSEQ2 pipeline for processing CPTAC3 somatic WGS CNA☆16Apr 13, 2021Updated 5 years ago
- ☆14Mar 18, 2025Updated last year
- For documenting issues related to BugSigDB curation.☆19Feb 17, 2026Updated 2 months ago