Alternatives and similar repositories for metaRNA

Users that are interested in metaRNA are comparing it to the libraries listed below

• lgautier / fastq-and-furious
  Efficient handling of FASTQ files from Python
  ☆51Updated last month
• solvebio / veppy
  Variant Effect Prediction for Python
  ☆15Updated 8 years ago
• brentp / pyfasta
  fast, memory-efficient, pythonic (and command-line) access to fasta sequence files
  ☆88Updated 7 years ago
• gawbul / pyEnsemblRest
  A client for the Ensembl REST API written in the Python programming language
  ☆27Updated 3 months ago
• IQTLabs / freqgen
  🎯 Generate DNA sequences with specified amino acid, codon, and k-mer frequencies
  ☆17Updated 2 years ago
• Zsailer / phylopandas
  Pandas DataFrames for phylogenetics
  ☆74Updated 4 years ago
• brentp / fishers_exact_test
  Fishers Exact Test for Python (Cython)
  ☆66Updated 6 months ago
• IQTLabs / squiggle
  📈 DNA Sequence Visualization for Humans
  ☆41Updated 4 years ago
• apierleoni / BioGraPy
  Biological Graphic tool in Python
  ☆34Updated 5 years ago
• mengqvist / DNApy
  Code for DNA plasmid editing.
  ☆43Updated 7 years ago
• aquaskyline / Skyhawk
  An Artificial Neural Network-based discriminator for validating clinically significant genomic variants
  ☆35Updated last year
• openvax / pepdata
  Python interface to amino acid properties and IEDB
  ☆57Updated 11 months ago
• openvax / varcode
  Library for manipulating genomic variants and predicting their effects
  ☆85Updated last year
• goeckslab / isoseq-browser
  ☆13Updated 8 years ago
• brentp / toolshed
  python stuff I use
  ☆19Updated 5 years ago
• brentp / python-giggle
  python (cython) wrapper for https://github.com/ryanlayer/giggle for fast interval searching of huge datasets.
  ☆16Updated 7 years ago
• alexcoppe / bio-dockers
  Bio-dockers: dockerized bioinformatic tools
  ☆32Updated last month
• dib-lab / screed
  a simple read-only sequence database, designed for short reads
  ☆66Updated last year
• pycogent / pycogent
  PyCogent: Official repository for software and unit tests
  ☆91Updated 4 years ago
• Clinical-Genomics / chanjo
  Chanjo provides a better way to analyze coverage data in clinical sequencing.
  ☆51Updated 9 months ago
• clintval / genome-browser
  A lightweight Python graphing API for genomic features
  ☆15Updated 3 years ago
• rsemeraro / XomeBlender
  Generates synthetic cancer genomes with different contamination level and intra-tumor heterogeneity and devoid of any synthetic element
  ☆11Updated 5 years ago
• uci-cbcl / DeepCons
  Understanding sequence conservation with deep learning
  ☆20Updated 8 years ago
• gmcvicker / genome
  Python library and scripts for retrieval and storage of genomics data in HDF5 format
  ☆26Updated 6 years ago
• formbio / laava
  LAAVA: Long-read AAV Analysis
  ☆13Updated this week
• mebbert / VariantToolChest
  VariantToolChest (VTC) is intended to be a powerful tool chest to analyze VCF files. I encourage anyone to contribute their tools and hel…
  ☆25Updated 9 years ago
• ARTbio / GalaxyKickStart
  Ansible playbooks for Galaxy Server deployment
  ☆24Updated 2 years ago
• mdshw5 / simplesam
  Simple pure Python SAM parser and objects for working with SAM records
  ☆63Updated 3 years ago
• ENCODE-DCC / croo
  Cromwell output organizer
  ☆13Updated 4 years ago
• ncbi / magicblast
  ☆37Updated 5 months ago