prashnts / metaRNA
Find target sites for the miRNAs in genomic sequences
☆19Updated 7 years ago
Related projects ⓘ
Alternatives and complementary repositories for metaRNA
- Efficient handling of FASTQ files from Python☆50Updated 2 months ago
- Biological Graphic tool in Python☆34Updated 4 years ago
- python (cython) wrapper for https://github.com/ryanlayer/giggle for fast interval searching of huge datasets.☆16Updated 6 years ago
- Epigenetic Variability and Transcription Factor Motifs Analysis Pipeline☆30Updated 7 years ago
- Variant Effect Prediction for Python☆15Updated 7 years ago
- What's The Function of these genes?☆23Updated 7 years ago
- Chanjo provides a better way to analyze coverage data in clinical sequencing.☆50Updated 5 months ago
- Code for DNA plasmid editing.☆43Updated 6 years ago
- Fishers Exact Test for Python (Cython)☆64Updated 2 months ago
- fast, memory-efficient, pythonic (and command-line) access to fasta sequence files☆86Updated 6 years ago
- Python interface to amino acid properties and IEDB☆49Updated last month
- Tools for next-generation sequencing analysis☆88Updated 5 years ago
- Analysis toolkit and programming library for k-mer profiles☆30Updated 3 years ago
- Simple pure Python SAM parser and objects for working with SAM records☆62Updated 2 years ago
- Library for manipulating genomic variants and predicting their effects☆81Updated 4 months ago
- A software for the multispecies design of CRISPR/Cas9 libraries☆34Updated 2 years ago
- A client for the Ensembl REST API written in the Python programming language☆26Updated this week
- Collection of galaxy tools developed by the artbio-platform at the IBPS (Institut de Biologie Paris-Seine)☆12Updated 2 weeks ago
- Python library and scripts for retrieval and storage of genomics data in HDF5 format☆26Updated 5 years ago
- A web based tool to manage and automate the processing of publicly available datasets.☆39Updated 3 years ago
- BigWig manpulation tools using libBigWig and htslib☆28Updated 3 months ago
- A lightweight Python graphing API for genomic features☆15Updated 2 years ago
- Simple and efficient access to genomic data for deep learning models.☆43Updated 4 years ago
- An Artificial Neural Network-based discriminator for validating clinically significant genomic variants☆35Updated 10 months ago
- VariantToolChest (VTC) is intended to be a powerful tool chest to analyze VCF files. I encourage anyone to contribute their tools and hel…☆25Updated 8 years ago
- Validate FastQ Files☆36Updated 6 years ago
- http://www.combio.pl/alfree☆22Updated 2 years ago
- Log command line events to a graph database :)☆13Updated 8 years ago
- Generates synthetic cancer genomes with different contamination level and intra-tumor heterogeneity and devoid of any synthetic element☆10Updated 4 years ago
- Git mirror of Bioconductor SRAdb package☆21Updated 6 years ago