prashnts / metaRNALinks
Find target sites for the miRNAs in genomic sequences
☆18Updated 8 years ago
Alternatives and similar repositories for metaRNA
Users that are interested in metaRNA are comparing it to the libraries listed below
Sorting:
- Efficient handling of FASTQ files from Python☆51Updated 3 months ago
- Library for manipulating genomic variants and predicting their effects☆85Updated last year
- Understanding sequence conservation with deep learning☆20Updated 8 years ago
- Biological Graphic tool in Python☆34Updated 5 years ago
- python (cython) wrapper for https://github.com/ryanlayer/giggle for fast interval searching of huge datasets.☆15Updated 7 years ago
- fast, memory-efficient, pythonic (and command-line) access to fasta sequence files☆88Updated 7 years ago
- Variant Effect Prediction for Python☆15Updated 8 years ago
- Epigenetic Variability and Transcription Factor Motifs Analysis Pipeline☆31Updated 8 years ago
- python stuff I use☆19Updated 5 years ago
- Pandas DataFrames for phylogenetics☆74Updated 4 years ago
- Fishers Exact Test for Python (Cython)☆66Updated 8 months ago
- Python interface to amino acid properties and IEDB☆57Updated last year
- A client for the Ensembl REST API written in the Python programming language☆27Updated 3 weeks ago
- VariantToolChest (VTC) is intended to be a powerful tool chest to analyze VCF files. I encourage anyone to contribute their tools and hel…☆25Updated 9 years ago
- prioritize effects of variant annotations from VEP, SnpEff, et al.☆34Updated 11 months ago
- Simple and efficient access to genomic data for deep learning models.☆42Updated 5 years ago
- Chanjo provides a better way to analyze coverage data in clinical sequencing.☆50Updated 11 months ago
- Generates synthetic cancer genomes with different contamination level and intra-tumor heterogeneity and devoid of any synthetic element☆11Updated 5 years ago
- Python library and scripts for retrieval and storage of genomics data in HDF5 format☆27Updated 6 years ago
- An Artificial Neural Network-based discriminator for validating clinically significant genomic variants☆35Updated last year
- sequence alignment. global, local, glocal.☆42Updated 8 years ago
- python access to UCSC genomes database☆136Updated 5 years ago
- Code for DNA plasmid editing.☆43Updated 7 years ago
- 🎯 Generate DNA sequences with specified amino acid, codon, and k-mer frequencies☆17Updated 2 years ago
- GO enrichment with python -- pandas meets networkx☆88Updated 5 years ago
- PyCogent: Official repository for software and unit tests☆91Updated 4 years ago
- A lightweight Python graphing API for genomic features☆15Updated 3 years ago
- Flexible Integration of Data with Deep LEarning☆51Updated 2 years ago
- What's The Function of these genes?☆22Updated 8 years ago
- 📈 DNA Sequence Visualization for Humans☆42Updated 4 years ago