Alternatives and similar repositories for tools-artbio

Users that are interested in tools-artbio are comparing it to the libraries listed below

• tobiasrausch / nRex
  nRex: Germline and somatic single-nucleotide, short indel and structural variant calling
  ☆12Updated 2 months ago
• SGBC / galaksio
  An easy-to-use way for running Galaxy workflows.
  ☆20Updated 6 years ago
• bioforensics / pytaxonkit
  Python bindings for the TaxonKit library
  ☆41Updated last week
• jonas-fuchs / varVAMP
  Design degenerated primers on highly variable alignments for full genome sequencing or qPCR. Specifically developed for viruses.
  ☆44Updated 3 months ago
• adelq / dnds
  Calculate dN/dS ratio precisely (Ka/Ks) using a codon-by-codon counting method.
  ☆25Updated 7 years ago
• m-crown / SPEAR
  Systematic ProtEin AnnotatoR
  ☆19Updated 2 months ago
• ToniWestbrook / paladin
  Protein Alignment and Detection Interface
  ☆60Updated last year
• genomicsITER / NanoDJ
  NanoDJ: A Dockerized Jupyter Notebook for Interactive Oxford Nanopore MinION Sequence Manipulation and Genome Assembly
  ☆50Updated 5 years ago
• salzberg-lab / Balrog
  Bacterial Annotation by Learned Representation of Genes
  ☆58Updated 4 years ago
• zibraproject / zika-pipeline
  The Zika bioinformatics pipeline
  ☆36Updated 5 years ago
• foerstner-lab / gffpandas
  Parse GFF3 into Pandas dataframes
  ☆30Updated last year
• mbhall88 / container_recipes
  Repository with all my container recipes 👩‍🍳
  ☆17Updated last year
• jwintersinger / kablammo
  Interactive, web-based BLAST results visualization tool. Accessible at https://kablammo.wasmuthlab.org.
  ☆65Updated 3 years ago
• Psy-Fer / interARTIC
  InterARTIC - An interactive local web application for viral whole genome sequencing utilising the artic network pipelines..
  ☆31Updated last year
• usegalaxy-eu / usegalaxy-eu-tools
  List of tools included in https://usegalaxy.eu
  ☆34Updated this week
• neherlab / pan-genome-visualization
  Visualization of the pan-genome output by panX
  ☆65Updated 5 months ago
• pinellolab / CRISPRitz
  Tool package to perform in-silico CRISPR analysis and assessment
  ☆34Updated 3 weeks ago
• galaxyproject / gxadmin
  Handy command line utility for Galaxy administrators
  ☆24Updated 2 months ago
• sanger-pathogens / Fastaq
  Python3 scripts to manipulate FASTA and FASTQ files
  ☆72Updated 8 months ago
• SamStudio8 / majora2
  Malleable All-seeing Journal Of Research Artifacts
  ☆35Updated 2 years ago
• zavolanlab / zarp
  The Zavolab Automated RNA-seq Pipeline
  ☆36Updated 4 months ago
• dib-lab / 2018-ncbi-lineages
  Extract lineage CSVs from NCBI for use with sourmash lca.
  ☆29Updated 2 years ago
• RKMlab / perf
  PERF is an Exhaustive Repeat Finder
  ☆34Updated 4 years ago
• biocorecrg / BioNextflow
  A collection of modules and sub-workflows for Nextflow
  ☆28Updated last month
• fulcrumgenomics / fgpyo
  Quality of life improvements for Bioinformatics in Python.
  ☆31Updated last week
• prophyle / prophyle
  Accurate, resource-frugal and deterministic DNA sequence classifier.
  ☆36Updated last week
• fmalmeida / ngs-preprocess
  A pipeline for preprocessing NGS data from Illumina, Nanopore and PacBio technologies
  ☆35Updated last year
• replikation / poreCov
  SARS-CoV-2 workflow for nanopore sequence data
  ☆42Updated last week
• aziele / alfpy
  http://www.combio.pl/alfree
  ☆23Updated 3 years ago
• linsalrob / SRA_Metadata
  Get, parse, and extract information from the SRA metadata files
  ☆45Updated 3 years ago