dbcls / Togothon

Related projects ⓘ

Alternatives and complementary repositories for Togothon

• pitagora-network / DAT2-cwl
  Common Workflow Language definition files for workflows introduced in DAT2
  ☆11Updated 2 years ago
• ddbj / human-reseq
  ☆11Updated 2 years ago
• genome-sci / python_bioinfo_2022
  ☆11Updated last year
• yyoshiaki / ikra
  RNAseq pipeline centered on Salmon
  ☆27Updated last year
• sapporo-wes / sapporo
  A standard implementation conforming to the Global Alliance for Genomics and Health (GA4GH) Workflow Execution Service (WES) API specific…
  ☆19Updated 2 years ago
• pitagora-network / pitagora-cwl
  Common Workflow Language tools and workflows by Pitagora-Network
  ☆33Updated 2 years ago
• MoMI-G / MoMI-G
  Modular Multi-scale Integrated Genome Graph Browser
  ☆87Updated last week
• ocxtal / minialign
  [IMPORTANT: not for real data analysis, only for algorithm evaluation] fast and accurate alignment tool for PacBio and Nanopore long read…
  ☆126Updated 6 years ago
• Kan-E / RNAseqChef
  Web app for automated, systematic, and integrated RNA-seq differential expression analysis
  ☆13Updated this week
• misshie / ngsdat2
  NGS Data Analysis Textbook Version 2 (Disease Genome Analysis)
  ☆42Updated 3 years ago
• workflow-meetup-jp / workflow-meetup
  About Workflow related meetup
  ☆14Updated last month
• common-workflow-library / bio-cwl-tools
  CWL CommandLineTool descriptions for biology/life-sciences related applications
  ☆76Updated 3 months ago
• genome / breakdancer
  SV detection from paired end reads mapping
  ☆114Updated 5 years ago
• epi2me-labs / wf-basecalling
  ☆33Updated 2 weeks ago
• friend1ws / nanomonsv
  SV detection tool for nanopore sequence reads
  ☆88Updated 2 months ago
• NAL-i5K / GFF3toolkit
  Python programs for processing GFF3 files
  ☆95Updated 7 months ago
• MotomuMatsui / gs
  Graph Splitting Method
  ☆14Updated 5 years ago
• informationsea / transanno
  accurate LiftOver tool for new genome assemblies
  ☆110Updated 3 months ago
• microbialphenotypes / OMP-ontology
  This repository contains the editors's working copy of OMP and public release files.
  ☆8Updated 7 months ago
• mkasa / klab
  Kasahara lab. public repository.
  ☆14Updated last year
• roryk / tiny-test-data
  Super small biological datasets for unit testing
  ☆61Updated 5 years ago
• broadinstitute / gatk-sv
  A structural variation pipeline for short-read sequencing
  ☆171Updated this week
• mroosmalen / nanosv
  SV caller for nanopore data
  ☆90Updated 4 years ago
• charite / jannovar
  Annotation of VCF variants with functional impact and from databases (executable+library)
  ☆58Updated this week
• nextflow-io / nf-co2footprint
  [WIP] A Nextflow plugin to estimate the CO2 footprint of pipeline runs.
  ☆14Updated last month
• cancerit / NanoSeq
  Analysis software for Nanorate Sequencing (NanoSeq) experiments
  ☆13Updated last week
• Dfam-consortium / TETools
  Dfam Transposable Element Tools Docker container.
  ☆84Updated last month
• urmi-21 / orfipy
  Fast and flexible ORF finder
  ☆60Updated 2 years ago