CBGP-UPM-INIA-PUBLIC / Bioinfo_ProgrammingChallenges
A BioRuby-based course for the Computational Biology M.Sc. Programme
☆10Updated last year
Alternatives and similar repositories for Bioinfo_ProgrammingChallenges:
Users that are interested in Bioinfo_ProgrammingChallenges are comparing it to the libraries listed below
- Demonstrating best practices for bioinformatics command line tools☆116Updated 4 years ago
- V-pipe is a pipeline designed for analysing NGS data of short viral genomes☆136Updated this week
- repository of the 3-day course "First steps with Python in Life Sciences" from SIB-training☆59Updated last month
- Collect of SO Ontologies☆100Updated 5 months ago
- Assembly and intrahost/low-frequency variant calling for viral samples☆137Updated 2 weeks ago
- Sequana: a set of Snakemake NGS pipelines☆146Updated 2 months ago
- A small-RNA sequencing analysis pipeline☆83Updated 2 weeks ago
- Melbourne Bioinformatics documentation in markdown format☆113Updated 4 months ago
- Pipeline to fetch metadata and raw FastQ files from public databases☆174Updated 2 weeks ago
- Nextflow pipeline for analysis of direct RNA Nanopore reads☆101Updated last week
- A workflow for enhanced protein isoform detection through integration of long-read RNA-seq and mass spectrometry-based proteomics.☆46Updated 2 years ago
- Materials for Spring 2018 Applied Genomics Course☆78Updated 6 years ago
- HyPhy: Hypothesis testing using Phylogenies☆230Updated this week
- Project code for BioHackathon Europe 2022.☆20Updated last year
- A Python library for interacting with the Galaxy API☆90Updated last month
- A set of Shiny apps to provide interactive enrichment analysis and exploration of results.☆28Updated last week
- Modules to interface with tools used in Ensembl Gene Annotation Process and scripts to run pipelines☆18Updated this week
- Galaxy RNA workbench☆40Updated 4 years ago
- ☆62Updated 8 years ago
- The Ensembl Compara Perl API and SQL schema☆52Updated this week
- NanoDJ: A Dockerized Jupyter Notebook for Interactive Oxford Nanopore MinION Sequence Manipulation and Genome Assembly☆50Updated 5 years ago
- ☆28Updated 3 weeks ago
- A tool to circularize genome assemblies☆241Updated last year
- Galaxy wrappers for NCBI BLAST+ and related BLAST tools.☆75Updated last week
- Tool Shed repositories maintained by the Intergalactic Utilities Commission☆171Updated this week
- All source code of the crispor.org website☆75Updated 3 months ago
- Practical, reusable scripts for bioinformatics☆99Updated 6 years ago
- GWAS Pipeline for H3Africa☆108Updated 3 weeks ago
- Bioinformatics Workbook repository☆183Updated last week
- Fast and flexible ORF finder☆69Updated 3 years ago