pbenner / goneticsLinks
Go / Golang Bioinformatics Library
☆45Updated last year
Alternatives and similar repositories for gonetics
Users that are interested in gonetics are comparing it to the libraries listed below
Sorting:
- Bioinformatic infrastructure libraries☆78Updated 5 years ago
- Suite of tools for use in genome assembly and consensus. Work in progress.☆31Updated 4 years ago
- Streaming relation (overlap, distance, KNN) of (any number of) sorted genomic interval sets. #golang☆47Updated 5 years ago
- Golang for Bioinformatics☆31Updated 9 years ago
- A lightweight and high-performance bioinformatics package in Golang☆95Updated last month
- Convert, explore, and manipulate GFF and GTF files (used in bioinformatics) using a sqlite-based approach☆36Updated 14 years ago
- A collection of genomics software tools written in Go (golang).☆86Updated last week
- a pileup library that embraces the huge☆43Updated 5 years ago
- A collection of publications on comparison of high-throughput sequencing technologies.☆27Updated last week
- overlapping bases in read-pairs from a fragment indicate accuracy and reveal error-prone sites☆33Updated 6 months ago
- BigWig manpulation tools using libBigWig and htslib☆30Updated last year
- A versatile toolkit for k-mers with taxonomic information☆81Updated 3 months ago
- ☆36Updated 7 months ago
- (WIP) best-practices workflow for rare disease☆62Updated last year
- SQL-like query language for the SAM/BAM file format☆29Updated 2 years ago
- Library of snakemake rules.☆12Updated 7 years ago
- Squeakr: An Exact and Approximate k -mer Counting System☆85Updated 9 months ago
- RetroSeq is a bioinformatics tool that searches for mobile element insertions from aligned reads in a BAM file and a library of reference…☆67Updated 3 years ago
- Fast and accurate sequence demultiplexing☆28Updated 6 months ago
- A better, faster way to count guides in CRISPR screens.☆34Updated 8 months ago
- Please consider using/contributing to https://github.com/nf-core/sarek☆41Updated 4 years ago
- software tool for the manipulation, annotation, selection, and analysis of variants in the context of next-gen sequencing analysis☆30Updated 3 years ago
- simple bioinformatics command-line (t)ools (i) (w)ished (i) (h)ad.☆44Updated 2 years ago
- A Snakefile to parallelize bwa.☆13Updated 12 years ago
- Single-Cell RNA-seq pseudo-aligner☆52Updated last year
- full taxonomer cython repository☆22Updated 6 years ago
- Grep for FASTQ files☆103Updated 2 weeks ago
- Analysis from kallisto paper☆32Updated 9 years ago
- Histosketching Using Little Kmers☆56Updated 2 years ago
- a wee tool for random access into BGZF files.☆85Updated 7 years ago