pbenner / goneticsLinks
Go / Golang Bioinformatics Library
☆45Updated 9 months ago
Alternatives and similar repositories for gonetics
Users that are interested in gonetics are comparing it to the libraries listed below
Sorting:
- Golang for Bioinformatics☆31Updated 8 years ago
- Bioinformatic infrastructure libraries☆79Updated 4 years ago
- Streaming relation (overlap, distance, KNN) of (any number of) sorted genomic interval sets. #golang☆47Updated 5 years ago
- Suite of tools for use in genome assembly and consensus. Work in progress.☆31Updated 4 years ago
- A lightweight and high-performance bioinformatics package in Golang☆94Updated 10 months ago
- Convert, explore, and manipulate GFF and GTF files (used in bioinformatics) using a sqlite-based approach☆36Updated 14 years ago
- a pileup library that embraces the huge☆43Updated 4 years ago
- overlapping bases in read-pairs from a fragment indicate accuracy and reveal error-prone sites☆33Updated 2 months ago
- full taxonomer cython repository☆22Updated 5 years ago
- SQL-like query language for the SAM/BAM file format☆29Updated last year
- ☆37Updated 3 months ago
- simple bioinformatics command-line (t)ools (i) (w)ished (i) (h)ad.☆44Updated 2 years ago
- BigWig manpulation tools using libBigWig and htslib☆29Updated last year
- Histosketching Using Little Kmers☆57Updated 2 years ago
- Method for detecting STR expansions from short-read sequencing data☆63Updated 3 years ago
- (WIP) best-practices workflow for rare disease☆60Updated last year
- Squeakr: An Exact and Approximate k -mer Counting System☆85Updated 5 months ago
- HPG Aligner is an ultrafast and highly sensitive Next-Generation Sequencing (NGS) mapper which supoprts both DNA and RNA alignment☆34Updated 8 years ago
- a wee tool for random access into BGZF files.☆85Updated 7 years ago
- A software for the multispecies design of CRISPR/Cas9 libraries☆36Updated 2 years ago
- Ultra-efficient taxonomic mapping of NGS data☆52Updated 4 years ago
- A collection of genomics software tools written in Go (golang).☆85Updated last week
- A versatile toolkit for k-mers with taxonomic information☆80Updated last year
- Please consider using/contributing to https://github.com/nf-core/sarek☆40Updated 4 years ago
- Numerical Encoding for Human Genetic Variants☆41Updated 2 years ago
- Maximum likelihood demultiplexing☆47Updated 5 months ago
- software tool for the manipulation, annotation, selection, and analysis of variants in the context of next-gen sequencing analysis☆31Updated 3 years ago
- RetroSeq is a bioinformatics tool that searches for mobile element insertions from aligned reads in a BAM file and a library of reference…☆67Updated 2 years ago
- Tools for next-generation sequencing analysis☆88Updated 6 years ago
- Standalone C library for assembling Illumina short reads in small regions☆72Updated 2 years ago