shenwei356 / bioLinks
A lightweight and high-performance bioinformatics package in Golang
☆95Updated 2 months ago
Alternatives and similar repositories for bio
Users that are interested in bio are comparing it to the libraries listed below
Sorting:
- biogo high throughput sequencing repository☆132Updated 4 months ago
- Go / Golang Bioinformatics Library☆45Updated last year
- Bioinformatic infrastructure libraries☆78Updated 5 years ago
- A collection of genomics software tools written in Go (golang).☆86Updated this week
- a golang library to read, write and manipulate files in the variant call format.☆72Updated 4 months ago
- goleft is a collection of bioinformatics tools distributed under MIT license in a single static binary☆224Updated 4 months ago
- Golang for Bioinformatics☆31Updated 9 years ago
- Genotype and phase short tandem repeats using Illumina whole-genome sequencing data☆100Updated 2 years ago
- Interval data structure☆235Updated last year
- Lollipop-style mutation diagrams for annotating genetic variations.☆195Updated last year
- 🌈Scaffold genome sequence assemblies using linked or long read sequencing data☆95Updated last year
- LoFreq Star: Sensitive variant calling from sequencing data☆109Updated 3 months ago
- AdapterRemoval v2 - rapid adapter trimming, identification, and read merging☆113Updated this week
- NEAT read simulation tools☆101Updated 3 years ago
- Graph realignment tools for structural variants☆165Updated 3 years ago
- Julia package powering VIVA, our tool for visualization of genomic variation data. Manual:☆87Updated 2 years ago
- A versatile toolkit for k-mers with taxonomic information☆81Updated 4 months ago
- Accurate metagenomic profiling && Fast large-scale sequence/genome searching☆205Updated 2 years ago
- structural variant calling and genotyping with existing tools, but, smoothly.☆262Updated last year
- Goalign is a set of command line tools and an API to manipulate multiple sequence alignments. It is implemented in Go language.☆87Updated last week
- Population-scale genotyping using pangenome graphs☆195Updated last year
- ABRA2☆95Updated 3 years ago
- A tool to identify, orient, trim and rescue full length cDNA reads☆83Updated 3 years ago
- Squeakr: An Exact and Approximate k -mer Counting System☆86Updated 10 months ago
- Scallop is a reference-based transcriptome assembler for RNA-seq☆92Updated 4 years ago
- Quality control tools for nanopore sequencing data☆111Updated last year
- A fast Python and command-line utility for extracting simple statistics against genome positions based on sequence alignments from a SAM …☆195Updated 2 weeks ago
- Variant calling tool for long-read sequencing data☆116Updated 10 months ago
- ☆96Updated 3 years ago
- Understand your transcriptome assembly☆102Updated last year