shenwei356 / bioLinks
A lightweight and high-performance bioinformatics package in Golang
☆95Updated last month
Alternatives and similar repositories for bio
Users that are interested in bio are comparing it to the libraries listed below
Sorting:
- biogo high throughput sequencing repository☆129Updated last month
- Bioinformatic infrastructure libraries☆78Updated 5 years ago
- Go / Golang Bioinformatics Library☆45Updated 11 months ago
- A collection of genomics software tools written in Go (golang).☆86Updated this week
- a golang library to read, write and manipulate files in the variant call format.☆71Updated last month
- goleft is a collection of bioinformatics tools distributed under MIT license in a single static binary☆224Updated 3 weeks ago
- LoFreq Star: Sensitive variant calling from sequencing data☆107Updated 3 years ago
- Genotype and phase short tandem repeats using Illumina whole-genome sequencing data☆99Updated 2 years ago
- Golang for Bioinformatics☆31Updated 9 years ago
- Lollipop-style mutation diagrams for annotating genetic variations.☆194Updated last year
- Interval data structure☆235Updated 10 months ago
- AdapterRemoval v2 - rapid adapter trimming, identification, and read merging☆113Updated last week
- 🌈Scaffold genome sequence assemblies using linked or long read sequencing data☆95Updated 11 months ago
- ABRA2☆93Updated 2 years ago
- Suite of tools for use in genome assembly and consensus. Work in progress.☆31Updated 4 years ago
- structural variant calling and genotyping with existing tools, but, smoothly.☆257Updated last year
- A fast Python and command-line utility for extracting simple statistics against genome positions based on sequence alignments from a SAM …☆194Updated last week
- Program for aligning DNA sequences, a pairwise aligner.☆227Updated 3 months ago
- Accurate metagenomic profiling && Fast large-scale sequence/genome searching☆199Updated 2 years ago
- Graph realignment tools for structural variants☆162Updated 2 years ago
- NEAT read simulation tools☆101Updated 3 years ago
- Catalog of genomic indexes freely available from public clouds☆64Updated last month
- A tool to identify, orient, trim and rescue full length cDNA reads☆82Updated 3 years ago
- Julia package powering VIVA, our tool for visualization of genomic variation data. Manual:☆86Updated 2 years ago
- Population-scale genotyping using pangenome graphs☆192Updated 9 months ago
- Gotree is a set of command line tools and an API to manipulate phylogenetic trees. It is implemented in Go language.☆134Updated this week
- Scalable gVCF merging and joint variant calling for population sequencing projects☆171Updated last year
- Standalone C library for assembling Illumina short reads in small regions☆72Updated 2 years ago
- ☆82Updated 6 years ago
- HTSeq is a Python library to facilitate processing and analysis of data from high-throughput sequencing (HTS) experiments.☆127Updated 5 years ago