pnnl / deimos
☆32Updated last month
Alternatives and similar repositories for deimos:
Users that are interested in deimos are comparing it to the libraries listed below
- TidyMS: Tools for working with MS data in untargeted metabolomics☆55Updated 9 months ago
- ☆24Updated last year
- A small library to provide peak picking for software processing mass spectrometry data☆21Updated 4 months ago
- NeatMS is an open source python package for untargeted LCMS signal labelling and filtering.☆32Updated 3 years ago
- This repository contains training data for retention time prediction for the identification of metabolites from non-targeted LC-MS based …☆44Updated 3 weeks ago
- A bioinformatic tool facilitating automated in-source fragmentation identification☆10Updated 2 years ago
- R-package - Automated Evaluation of Precursor Ion Purity for Mass Spectrometry Based Fragmentation in Metabolomics☆16Updated 11 months ago
- ☆18Updated 11 months ago
- Large-scale tandem mass spectrum clustering using fast nearest neighbor searching.☆28Updated last month
- Flash entropy search☆14Updated last year
- Streamlining Mass Spectrometry Data Visualization with Pandas☆14Updated 3 weeks ago
- Deep learning similarity measure for comparing MS/MS spectra with respect to their chemical similarity☆60Updated last month
- Bottom-up MS/MS interrogation & Experiment-specific global annotation☆28Updated 4 months ago
- RHermes is a semi-targeted metabolomics package to deeply characterize biological and environmental samples.☆25Updated 3 weeks ago
- A workflow for metabolite identification and accurate profiling in multidimensional LC-IM-MS-DIA measurements. DOI: 10.5281/zenodo.☆14Updated last year
- pyQms, generalized, fast and accurate mass spectrometry data quantification☆28Updated 9 months ago
- MS2Query - machine learning assisted library querying of MS/MS spectra☆44Updated 7 months ago
- Meet FIORA! An in silico fragmentation algorithm designed to predict tandem mass spectra (MS/MS) with high accuracy. Using graph neural n…☆30Updated this week
- ☆23Updated 3 weeks ago
- A Python implementation of Baffling Recursive Algorithm for Isotopic distributioN calculations☆21Updated 3 months ago
- a python package for molecular formula analysis in MS-based small molecule studies☆26Updated 2 months ago
- Common utilities for parsing and handling peptide-spectrum matches and search engine results in Python☆27Updated this week
- ☆9Updated 7 months ago
- ☆16Updated 2 years ago
- The Mass Spec Query Language (MassQL) is a domain specific language meant to be a succinct way to express a query in a mass spectrometry …☆39Updated 4 months ago
- Spectral entropy for mass spectrometry data.☆27Updated last month
- This work was published on Analytical Chemistry: Full-Spectrum Prediction of Peptides Tandem Mass Spectra using Deep Neural Network☆29Updated last year
- ☆11Updated this week
- Improve the accuracy of database search by using BERT to embed MS/MS reasonably☆16Updated 6 months ago
- ☆31Updated 4 months ago