HuanLab / BUDDYLinks
Bottom-up MS/MS interrogation & Experiment-specific global annotation
☆29Updated 7 months ago
Alternatives and similar repositories for BUDDY
Users that are interested in BUDDY are comparing it to the libraries listed below
Sorting:
- a python package for molecular formula analysis in MS-based small molecule studies☆28Updated 3 weeks ago
- MS2Query - machine learning assisted library querying of MS/MS spectra☆45Updated 2 months ago
- NeatMS is an open source python package for untargeted LCMS signal labelling and filtering.☆33Updated 3 years ago
- Public Workflows at GNPS☆62Updated last year
- Metabolome Annotation Workflow☆25Updated last year
- FBMN-STATS: A hitchhiker's guide to statistical analysis of Feature-based Molecular Networks☆39Updated last month
- ☆68Updated 11 months ago
- Untargeted metabolomics workflow for data processing and analysis written in Jupyter notebooks (Python)☆22Updated 8 months ago
- RHermes is a semi-targeted metabolomics package to deeply characterize biological and environmental samples.☆28Updated 2 months ago
- SIRIUS is a software for discovering a landscape of de-novo identification of metabolites using tandem mass spectrometry. This repository…☆111Updated last week
- Deep learning similarity measure for comparing MS/MS spectra with respect to their chemical similarity☆67Updated 2 weeks ago
- asari, metabolomics data preprocessing☆51Updated last week
- MetEx is a tool to extract and annotate metabolites from liquid chromatography–mass spectrometry data.☆16Updated last year
- deep learning based prediction of structures and functional groups from MS/MS spectra☆12Updated 6 months ago
- ☆23Updated 4 months ago
- TidyMS: Tools for working with MS data in untargeted metabolomics☆56Updated last year
- ☆35Updated 2 months ago
- Workflow solutions for mass-spectrometry based non-target analysis.☆66Updated this week
- This repository contains training data for retention time prediction for the identification of metabolites from non-targeted LC-MS based …☆52Updated 2 weeks ago
- R Package for Systematic Optimization of Metabolomic Data Processing☆17Updated 4 months ago
- ☆25Updated last month
- ☆27Updated last year
- The Mass Spec Query Language (MassQL) is a domain specific language meant to be a succinct way to express a query in a mass spectrometry …☆53Updated last month
- Python pipeline for metabolomics data preprocessing, QC, standardization and annotation☆15Updated 2 weeks ago
- A python client for the ClassyFire API☆16Updated 5 years ago
- ☆32Updated 7 months ago
- Improve the accuracy of database search by using BERT to embed MS/MS reasonably☆18Updated 9 months ago
- Relaunch of the initial MetFrag project.☆18Updated this week
- Spectral entropy for mass spectrometry data.☆29Updated 5 months ago
- ☆14Updated last month