HuanLab / BUDDY
Bottom-up MS/MS interrogation & Experiment-specific global annotation
☆29Updated 2 months ago
Related projects ⓘ
Alternatives and complementary repositories for BUDDY
- FBMN-STATS: A hitchhiker's guide to statistical analysis of Feature-based Molecular Networks☆32Updated last month
- Metabolome Annotation Workflow☆25Updated 8 months ago
- MS2Query - machine learning assisted library querying of MS/MS spectra☆39Updated 2 months ago
- a python package for molecular formula analysis in MS-based small molecule studies☆21Updated 3 weeks ago
- Public Workflows at GNPS☆54Updated 9 months ago
- asari, metabolomics data preprocessing☆42Updated this week
- ☆22Updated 9 months ago
- TidyMS: Tools for working with MS data in untargeted metabolomics☆53Updated 4 months ago
- RHermes is a semi-targeted metabolomics package to deeply characterize biological and environmental samples.☆25Updated last year
- MetEx is a tool to extract and annotate metabolites from liquid chromatography–mass spectrometry data.☆16Updated last year
- SIRIUS is a software for discovering a landscape of de-novo identification of metabolites using tandem mass spectrometry. This repository…☆88Updated 3 weeks ago
- Molecular formula discovery via bottom-up MS/MS interrogation☆13Updated 2 months ago
- This repository contains training data for retention time prediction for the identification of metabolites from non-targeted LC-MS based …☆38Updated this week
- ☆31Updated last year
- ☆25Updated 11 months ago
- The Mass Spec Query Language (MassQL) is a domain specific language meant to be a succinct way to express a query in a mass spectrometry …☆38Updated 4 months ago
- NeatMS is an open source python package for untargeted LCMS signal labelling and filtering.☆28Updated 3 years ago
- R Package for Systematic Optimization of Metabolomic Data Processing☆17Updated last year
- Untargeted metabolomics workflow for data processing and analysis written in Jupyter notebooks (Python)☆18Updated last week
- Democratizing ML in proteomics☆28Updated last week
- ☆19Updated last month
- R-package - Automated Evaluation of Precursor Ion Purity for Mass Spectrometry Based Fragmentation in Metabolomics☆15Updated 6 months ago
- ☆14Updated 6 months ago
- ☆32Updated 5 months ago
- A global network optimization approach for untargeted LC-MS metabolomics data annotation and metabolite discovery☆44Updated last year
- Workflow solutions for mass-spectrometry based non-target analysis.☆64Updated this week
- A python client for the ClassyFire API☆15Updated 4 years ago
- Deep learning similarity measure for comparing MS/MS spectra with respect to their chemical similarity☆56Updated this week
- A small library to provide peak picking for software processing mass spectrometry data☆20Updated 2 months ago
- ☆22Updated last year