HuanLab / BUDDYLinks
Bottom-up MS/MS interrogation & Experiment-specific global annotation
☆28Updated 5 months ago
Alternatives and similar repositories for BUDDY
Users that are interested in BUDDY are comparing it to the libraries listed below
Sorting:
- MS2Query - machine learning assisted library querying of MS/MS spectra☆45Updated 2 weeks ago
- a python package for molecular formula analysis in MS-based small molecule studies☆27Updated 3 months ago
- RHermes is a semi-targeted metabolomics package to deeply characterize biological and environmental samples.☆27Updated this week
- ☆25Updated last year
- Metabolome Annotation Workflow☆25Updated last year
- FBMN-STATS: A hitchhiker's guide to statistical analysis of Feature-based Molecular Networks☆38Updated 3 months ago
- MetEx is a tool to extract and annotate metabolites from liquid chromatography–mass spectrometry data.☆16Updated last year
- R Package for Systematic Optimization of Metabolomic Data Processing☆17Updated 2 months ago
- A bioinformatic tool facilitating automated in-source fragmentation identification☆10Updated 2 years ago
- Molecular formula discovery via bottom-up MS/MS interrogation☆13Updated 9 months ago
- Public Workflows at GNPS☆61Updated last year
- ☆12Updated last week
- deep learning based prediction of structures and functional groups from MS/MS spectra☆12Updated 4 months ago
- A known-to-unknown metabolite identification workflow☆21Updated 4 years ago
- This repository contains training data for retention time prediction for the identification of metabolites from non-targeted LC-MS based …☆47Updated 2 months ago
- Untargeted metabolomics workflow for data processing and analysis written in Jupyter notebooks (Python)☆21Updated 6 months ago
- A python client for the ClassyFire API☆16Updated 5 years ago
- asari, metabolomics data preprocessing☆49Updated last week
- ☆19Updated last year
- Python pipeline for metabolomics data preprocessing, QC, standardization and annotation☆14Updated 6 months ago
- Deep learning similarity measure for comparing MS/MS spectra with respect to their chemical similarity☆61Updated last week
- ☆34Updated last week
- NeatMS is an open source python package for untargeted LCMS signal labelling and filtering.☆32Updated 3 years ago
- ☆25Updated last year
- TidyMS: Tools for working with MS data in untargeted metabolomics☆55Updated 10 months ago
- Improve the accuracy of database search by using BERT to embed MS/MS reasonably☆18Updated 7 months ago
- Workflow solutions for mass-spectrometry based non-target analysis.☆65Updated this week
- Spectral entropy for mass spectrometry data.☆29Updated 3 months ago
- ☆23Updated 2 months ago
- SIRIUS is a software for discovering a landscape of de-novo identification of metabolites using tandem mass spectrometry. This repository…☆105Updated last week