Alternatives and similar repositories for DeepMSPeptide

Users that are interested in DeepMSPeptide are comparing it to the libraries listed below

• kruvelab / MS2Tox
  MS2Tox is a machine learning tool for predicting ecotoxicity of unidentified chemicals in water by nontarget LC/HRMS
  ☆16Updated last month
• PHOENIXcenter / deeprtalign
  a deep learning-based retention time alignment tool for large cohort LC-MS data analysis
  ☆13Updated last year
• grosenberger / easypqp
  EasyPQP: Simple library generation for OpenSWATH
  ☆11Updated this week
• MarcIsak / MSLibrarian
  MSLibrarian is an R-package to optimize predicted spectral libraries for DIA proteomics
  ☆14Updated 3 years ago
• pFindStudio / pDeep3
  MS/MS prediction for peptides
  ☆24Updated 4 years ago
• zmahnoor14 / MAW
  Metabolome Annotation Workflow
  ☆25Updated last year
• dphansti / CORAL
  ☆29Updated 3 years ago
• ZhuMetLab / MetDNA2
  Knowledge-guided multilayer network approach is executed in MetDNA2
  ☆16Updated 2 years ago
• CompOmics / IM2Deep
  Collisional cross-section prediction for modified and multiconformational peptides
  ☆13Updated 2 months ago
• bittremieux-lab / GLEAMS
  GLEAMS is a Learned Embedding for Annotating Mass Spectra.
  ☆26Updated 2 years ago
• xia-lab / OptiLCMS
  R package for optimized LC-MS spectra processing
  ☆25Updated last month
• Roestlab / DIAlignR
  This is a R package for alignment of DIA mass-spec data
  ☆12Updated 4 years ago
• ipb-halle / MetFragRelaunched
  Relaunch of the initial MetFrag project.
  ☆19Updated last month
• Roestlab / massdash
  MassDash: A web-based dashboard for streamlined DIA-MS visualization, analysis, prototyping, and optimization
  ☆21Updated last week
• hcji / DeepMASS2_GUI
  DeepMASS2 is a cross-platform GUI software tool, which enables deep-learning based metabolite annotation via semantic similarity analysis…
  ☆10Updated 4 months ago
• shuzhao-li / mummichog
  pathway and network analysis for metabolomics
  ☆42Updated last year
• alexandrovteam / curatr
  ☆14Updated 2 years ago
• EMSL-Computing / PeakDecoder
  A workflow for metabolite identification and accurate profiling in multidimensional LC-IM-MS-DIA measurements. DOI: 10.5281/zenodo.
  ☆16Updated 2 years ago
• pattilab / DecoID
  Metabolomics software for database-assisted deconvolution of MS/MS spectra
  ☆19Updated last year
• eMetaboHUB / MS-CleanR
  ☆25Updated last year
• WMBEdmands / compMS2Miner
  metabolite identification R-package for metabolomic high-resolution LC-MS datasets.
  ☆16Updated 8 years ago
• pnnl / MSAC
  ☆23Updated 7 months ago
• ODonnell-Lipidomics / LipidFinder
  LipidFinder: A computational workflow for discovery of new lipid molecular species
  ☆21Updated 4 years ago
• zhengfj1994 / MetEx
  MetEx is a tool to extract and annotate metabolites from liquid chromatography–mass spectrometry data.
  ☆17Updated last year
• qzhang503 / proteoQ
  Processing and analysis of proteomics data
  ☆17Updated 7 months ago
• zamboni-lab / SLAW
  Scalable and self-optimizing processing workflow for untargeted LC-MS
  ☆29Updated last year
• markmipt / ms1searchpy
  ☆12Updated last week
• computational-metabolomics / msPurity
  A Bioconductor R package - Automated Evaluation of Precursor Ion Purity for Mass Spectrometry Based Fragmentation in Metabolomics
  ☆16Updated last year
• ZhuMSLab / DecoMetDIA
  ☆12Updated 3 years ago
• ipb-halle / MetFrag
  Repo hosting the MetFrag website
  ☆10Updated 9 months ago