KavrakiLab / Spec2MolLinks
☆27Updated 2 years ago
Alternatives and similar repositories for Spec2Mol
Users that are interested in Spec2Mol are comparing it to the libraries listed below
Sorting:
- Encoding MS/MS spectra using formula transformers for inferring molecular properties☆68Updated last year
- ☆71Updated last year
- Efficiently predicting high resolution mass spectra with graph neural networks☆30Updated 2 years ago
- ☆22Updated 2 months ago
- ☆33Updated 11 months ago
- Deep learning similarity measure for comparing MS/MS spectra with respect to their chemical similarity☆71Updated last week
- This repository contains training data for retention time prediction for the identification of metabolites from non-targeted LC-MS based …☆57Updated last week
- [Bioinformatics] 3DMolMS: prediction of tandem mass spectra from 3D molecular conformations☆23Updated last month
- Bioinformatics and Cheminformatics protocols for peptide analysis☆43Updated 2 years ago
- ☆28Updated last year
- A python client for the ClassyFire API☆16Updated 5 years ago
- ☆11Updated 3 years ago
- Predicting tandem mass spectra from molecules☆114Updated 3 weeks ago
- Predicting MS1 precursor chemical formula from MS/MS data☆22Updated 2 years ago
- Predicting molecular fingerprint from electron−ionization mass spectrum with deep neural networks☆36Updated last year
- a python package for molecular formula analysis in MS-based small molecule studies☆31Updated 4 months ago
- Awesome papers and codes list of small molecule mass spectrometry-related machine learning methods☆34Updated last month
- Direct-to-SVG small molecule drawer.☆27Updated 9 months ago
- ☆27Updated 4 years ago
- MassSpecGym: A benchmark for the discovery and identification of molecules (NeurIPS 2024 Spotlight)☆98Updated this week
- ☆25Updated 4 months ago
- Bottom-up MS/MS interrogation & Experiment-specific global annotation☆30Updated 11 months ago
- Meet FIORA! An in silico fragmentation algorithm designed to predict tandem mass spectra (MS/MS) with high accuracy. Using graph neural n…☆44Updated last month
- Improve the accuracy of database search by using BERT to embed MS/MS reasonably☆19Updated last year
- Open Source, Mostly just clicking mouse to finish a simulation with Ambertools and OpenMM. It was designed to use locally but another not…☆37Updated 6 months ago
- A Python implementation of Baffling Recursive Algorithm for Isotopic distributioN calculations☆23Updated 5 months ago
- ☆17Updated last month
- Untargeted metabolomics workflow for data processing and analysis written in Jupyter notebooks (Python)☆23Updated last year
- COCONUT (COlleCtion of Open Natural prodUcTs): A comprehensive platform facilitating natural product research by providing data, tools, a…☆42Updated this week
- ☆15Updated 4 years ago